Showing : TxDb.Hsapiens.UCSC.hg38.knownGene • reset
1
vote
12
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4.1k
views
Error: C stack usage when installing Txdb package
txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db
updated 8.2 years ago by ★ 3.8k • written 8.2 years ago by ★ 1.1k
2
votes
10
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4.2k
views
TxDb.Hsapiens.UCSC.hg38.ensGene doesn't exist
TxDb.Hsapiens.UCSC.hg38.knownGene TxDb.Mmusculus.UCSC.mm10.ensGene
updated 6.3 years ago by 68k • written 6.3 years ago by ▴ 160
4
votes
8
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3.4k
views
TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from various chromosome being part of the same gene
MetID TxDB.Hsapiens.UCSC.hg38.knownGene locateVariants GenomicFeatures VariantAnnotation
2.9 years ago davidhillis • 0
6
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5
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1.7k
views
PTEN missing from TxDb.Hsapiens.UCSC.hg38.knownGene?
TxDb annotation TxDb.Hsapiens.UCSC.hg38.knownGene
updated 6.1 years ago by 4.3k • written 6.1 years ago by ▴ 150
2
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5
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3.0k
views
How to construct a subset of TxDb object from TxDb.Hsapiens.UCSC.hg38.knownGene and selected genes
TxDb.Hsapiens.UCSC.hg38.knownGene subset TxDb object
6.8 years ago Ruichao.Zeng ▴ 20
9
votes
4
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4.3k
views
PDCD1 missing from TxDb.Hsapiens.UCSC.hg38.knownGene?
txdb txdb.hsapiens.ucsc.hg19.knowngene txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db annotation
9.8 years ago enricoferrero ▴ 680
2
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4
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1.8k
views
Help with Missing Gene from hg38
annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38
updated 6.0 years ago by ▴ 160 • written 6.0 years ago by • 0
0
votes
3
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2.2k
views
transcripts are not true in TxDb.Hsapiens.UCSC.hg38.knownGene
TxDb.Hsapiens.UCSC.hg38.knownGene
updated 4.2 years ago by 16k • written 4.2 years ago by • 0
3
votes
3
replies
3.4k
views
Transcripts in TxDb.Hsapiens.UCSC.hg38.knownGene but not in ucsc genome brower
annotation txdb.hsapiens.ucsc.hg38.knowngene bug
9.3 years ago shilin.zhao ▴ 40
0
votes
2
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1.2k
views
microRNAs not available in TxDb.Hsapiens.UCSC.hg38.knownGene
microRNA TxDb.Hsapiens.UCSC.hg38.knownGene
3.1 years ago Lluís Revilla Sancho ▴ 760
0
votes
1
reply
483
views
promoters_txdb <- promoters(txdb, upstream = 2000) is not 2000
TxDb.Hsapiens.UCSC.hg38.knownGene
updated 13 months ago by 68k • written 13 months ago by ▴ 20
0
votes
1
reply
2.7k
views
No 'TxDb.Hsapiens.UCSC.hg38.knownGene' object
TxDb.Hsapiens.UCSC.hg38.knownGene
updated 5.0 years ago by 68k • written 5.0 years ago by • 0
2
votes
1
reply
5.2k
views
Bioconductor Package Installation
install TxDb.Hsapiens.UCSC.hg38.knownGene
3.9 years ago Theresa ▴ 20
3
votes
1
reply
1.3k
views
HLA genes missing from TxDb.Hsapiens.UCSC.hg38.knownGene
HLA TxDb.Hsapiens.UCSC.hg38.knownGene
updated 6.1 years ago by ▴ 160 • written 6.1 years ago by ▴ 30
1
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0
replies
2.1k
views
Issue with bumphunter and TxDb.Hsapiens.UCSC.hg38.knownGene that could be due to S4Vectors or an installation problem
s4vectors bumphunter txdb.hsapiens.ucsc.hg38.knowngene
8.4 years ago Leonardo Collado Torres ★ 1.1k
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