Showing : TxDb.Hsapiens.UCSC.hg38.knownGene • reset
2
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1
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4.6k
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Bioconductor Package Installation
install TxDb.Hsapiens.UCSC.hg38.knownGene
2.9 years ago Theresa ▴ 20
7
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4
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3.9k
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PDCD1 missing from TxDb.Hsapiens.UCSC.hg38.knownGene?
txdb txdb.hsapiens.ucsc.hg19.knowngene txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db annotation
8.8 years ago enricoferrero ▴ 660
2
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10
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3.4k
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TxDb.Hsapiens.UCSC.hg38.ensGene doesn't exist
TxDb.Hsapiens.UCSC.hg38.knownGene TxDb.Mmusculus.UCSC.mm10.ensGene
updated 5.3 years ago by 67k • written 5.3 years ago by ▴ 160
1
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12
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3.4k
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Error: C stack usage when installing Txdb package
txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db
updated 7.1 years ago by ★ 3.8k • written 7.1 years ago by ★ 1.1k
3
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3
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2.9k
views
Transcripts in TxDb.Hsapiens.UCSC.hg38.knownGene but not in ucsc genome brower
annotation txdb.hsapiens.ucsc.hg38.knowngene bug
8.3 years ago shilin.zhao ▴ 40
2
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5
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2.5k
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How to construct a subset of TxDb object from TxDb.Hsapiens.UCSC.hg38.knownGene and selected genes
TxDb.Hsapiens.UCSC.hg38.knownGene subset TxDb object
5.7 years ago Ruichao.Zeng ▴ 20
4
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8
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2.2k
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TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from various chromosome being part of the same gene
MetID TxDB.Hsapiens.UCSC.hg38.knownGene locateVariants GenomicFeatures VariantAnnotation
22 months ago davidhillis • 0
0
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1
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2.2k
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No 'TxDb.Hsapiens.UCSC.hg38.knownGene' object
TxDb.Hsapiens.UCSC.hg38.knownGene
updated 3.9 years ago by 67k • written 3.9 years ago by • 0
0
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3
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1.7k
views
transcripts are not true in TxDb.Hsapiens.UCSC.hg38.knownGene
TxDb.Hsapiens.UCSC.hg38.knownGene
updated 3.1 years ago by 16k • written 3.1 years ago by • 0
1
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0
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1.7k
views
Issue with bumphunter and TxDb.Hsapiens.UCSC.hg38.knownGene that could be due to S4Vectors or an installation problem
s4vectors bumphunter txdb.hsapiens.ucsc.hg38.knowngene
7.3 years ago Leonardo Collado Torres ★ 1.1k
6
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5
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1.3k
views
PTEN missing from TxDb.Hsapiens.UCSC.hg38.knownGene?
TxDb annotation TxDb.Hsapiens.UCSC.hg38.knownGene
updated 5.0 years ago by 4.1k • written 5.0 years ago by ▴ 150
2
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4
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1.2k
views
Help with Missing Gene from hg38
annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38
updated 4.9 years ago by ▴ 160 • written 4.9 years ago by • 0
3
votes
1
reply
999
views
HLA genes missing from TxDb.Hsapiens.UCSC.hg38.knownGene
HLA TxDb.Hsapiens.UCSC.hg38.knownGene
updated 5.0 years ago by ▴ 160 • written 5.0 years ago by ▴ 30
0
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2
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947
views
microRNAs not available in TxDb.Hsapiens.UCSC.hg38.knownGene
microRNA TxDb.Hsapiens.UCSC.hg38.knownGene
2.0 years ago Lluís Revilla Sancho ▴ 760
0
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1
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78
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promoters_txdb <- promoters(txdb, upstream = 2000) is not 2000
TxDb.Hsapiens.UCSC.hg38.knownGene
updated 9 days ago by 67k • written 9 days ago by ▴ 20
15 results • Page 1 of 1
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I am unable to find the math behind the dba.normalize(), for instance when the E-coli fraction is used is the signal mutliplied by the fact…
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Thanks Kelvin i had same doubt .Do i need to do log2 (FPKMcounts) for this
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Michael, Thank you very much!
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Yes, with the knowledge that, it is expected to be underpowered.
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