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Ubuntu
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0
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6
replies
4.2k
views
cummeRbund installation error on Ubuntu 14.04
software error
cummerbund
ubuntu
9.4 years ago • updated 9.1 years ago
mbk0asis
• 0
2
votes
4
replies
1.5k
views
R package for Meta-Analysis of CHIP-Seq data
chipseq
meta-analysis
ubuntu
6.9 years ago
rezapanahi222
• 0
1
vote
5
replies
2.2k
views
Unable to install scde in ubuntu 16.04 , this is what happens when I install scde
scde
ubuntu
dependencies
R
updated 7.2 years ago by
Martin Morgan
25k • written 7.2 years ago by
aditya531996
• 0
0
votes
2
replies
2.3k
views
Unable to install DeSeq2 and EdgeR in ubuntu 16.04 , this is what happens when I install DeSeq2
deseq2
ubuntu
edger
dependencies
7.2 years ago
aditya531996
• 0
1
vote
4
replies
2.5k
views
biocLite updating problem with Ubuntu 17.10
ubuntu
biocgenerics
s4vectors
IRanges
annotationdbi
updated 6.3 years ago by
Martin Morgan
25k • written 6.3 years ago by
KRA
• 0
9
votes
32
replies
5.9k
views
Rsamtools v 1.99.6 installation error
Rsamtools
BiocManager
R 3.6
ubuntu
updated 5.0 years ago by
Hervé Pagès
16k • written 5.0 years ago by
kubovcij
• 0
2
votes
2
replies
2.4k
views
Error during installation of ChemmineOB R package
Chemmine
Ubuntu
OpenBabel
updated 7.9 years ago by
Thomas Girke
★ 1.7k • written 7.9 years ago by
elisa.micarelli
▴ 10
5
votes
2
replies
1.1k
views
Codelink annotation error in Ubuntu 16.04
codelink
annotation
ubuntu
updated 7.4 years ago by
Martin Morgan
25k • written 7.4 years ago by
Agaz Hussain Wani
▴ 260
1
vote
2
replies
1.5k
views
Multiple problems with TCGAbiolinks 2.2.6
software error
tcgabiolinks
ubuntu
updated 7.4 years ago by
Tiago Chedraoui Silva
▴ 260 • written 7.4 years ago by
lmorrill
• 0
0
votes
4
replies
2.2k
views
Biocgenerics updating problem on ubuntu 17.10
bioconductor
biocgenerics
ubuntu
package updates
r update
6.4 years ago
siinemselvi
• 0
1
vote
3
replies
1.8k
views
Error on zlib.h while installing esATAC on Ubutu
software error
esATAC
zlib.h
Ubuntu
Tutorial
updated 4.8 years ago by
Martin Morgan
25k • written 4.8 years ago by
vedbar
• 0
0
votes
1
reply
1.9k
views
DeSeq2 installation on ubuntu fails
deseq2
R
ubuntu
bioconductor
rstudio
updated 5.8 years ago by
Michael Love
41k • written 5.8 years ago by
drumarsohail
• 0
1
vote
1
reply
9.0k
views
Problems to install a package - Ubuntu
ubuntu
package
installation
varianttools
updated 8.9 years ago by
James W. MacDonald
65k • written 8.9 years ago by
lelemraposo
• 0
0
votes
5
replies
2.0k
views
Flowclust install probelms on Ubuntu
flowclust
ubuntu
install
error
8.9 years ago
gareth.howell
• 0
5
votes
2
replies
2.4k
views
how can I access my local files (data, R-scripts) from the *docker* R/Bioconductor?
docker
ubuntu
updated 8.6 years ago by
Dan Tenenbaum
★ 8.2k • written 8.6 years ago by
anton.kratz
▴ 60
0
votes
2
replies
8.6k
views
[SOLVED] BUG REPORT: Ubuntu 14.04 xps Installation libcrypto.so.10
xps
ubuntu
updated 8.2 years ago by
cstrato
★ 3.9k • written 8.2 years ago by
alexvpickering
▴ 110
0
votes
3
replies
2.8k
views
ERROR: compilation failed for package RSQLite
ubuntu
installation
updated 6.3 years ago by
Martin Morgan
25k • written 6.3 years ago by
Deleted
▴ 70
0
votes
1
reply
1.0k
views
mzR installation on Ubuntu 16.04
mzr
package installation
ubuntu
updated 6.1 years ago by
Laurent Gatto
1.6k • written 6.1 years ago by
buescher
• 0
18 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 setting significant p-value
by
Dev
• 0
after running DESeq2 does it sort the value on the basis of pvalue, or anything, or does it give the data back in the input format I have …
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
But wouldn't this result in a different gene set for each analysis stratification? How can you then compare if maybe gene x comes up in Tim…
Comment: Reading huge bismark coverage files using bbseq::read.bismark
by
jacques.imbert
• 0
Hello, Using nThread = 1L fixed the issue. Thank you for your time and help.
Comment: Error in champ.load(): The following specified files do not exist
by
Basti
▴ 760
The error stems from the Basename column, please see solution here : https://support.bioconductor.org/p/p132482/
Comment: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Votes
Comment: Reading huge bismark coverage files using bbseq::read.bismark
Answer: Reading huge bismark coverage files using bbseq::read.bismark
Answer: Reading huge bismark coverage files using bbseq::read.bismark
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
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