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VariantFiltering
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Variant Filtering on very large VCF files
VariantAnnotation
VariantFiltering
7 months ago
Bogdan
▴ 670
0
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1
reply
343
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VariantFiltering error
VariantFiltering
updated 10 months ago by
Robert Castelo
★ 3.3k • written 10 months ago by
Andrew Beggs
▴ 90
0
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1
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1.5k
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Confused about understanding the output and statistics of BAM file after STAR aligning
RNAseq123
VariantFiltering
Alignment
VariantAnnotation
updated 17 months ago by
James W. MacDonald
65k • written 17 months ago by
Mohamed
▴ 30
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3
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1.4k
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library VaraintFiltration looking for explanation of pedigree file
bioconductor
variantfiltering
6.7 years ago
Claus.Hultschig
• 0
3
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2
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1.4k
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filtering VCF files
variantannotation
variantfiltering
updated 7.1 years ago by
Michael Lawrence
★ 11k • written 7.1 years ago by
Bogdan
▴ 670
0
votes
1
reply
1.1k
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Problems with autosomalRecessiveHomozygous
VariantFiltering
8.8 years ago
claire.simpson
• 0
4
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0
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1.5k
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News:
Hands-on Bioconductor course, 7 Sept 2015, Tokyo
sequencing
transcription
variantfiltering
annotation
News
8.9 years ago
Matthew Ritchie
▴ 1000
1
vote
1
reply
1.3k
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retrieving phastConsScores via 'scores' from 'VariantFiltering' shows inconsistency
variantfiltering
phastcons
updated 9.0 years ago by
Robert Castelo
★ 3.3k • written 9.0 years ago by
Stefanie Tauber
▴ 40
0
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0
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1.7k
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problems installing VariantFiltering package
VariantFiltering
VariantFiltering
9.9 years ago
Robert Castelo
★ 3.3k
9 results • Page
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Comment: minfi::read.metharray.exp
by
clacarion
• 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
Answer: List of Deprecated Packages for Bioc3.19
by
shepherl
3.8k
singleCellTK has been fixed and will remain in Bioconductor
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
It is indeed better. Anyway, did you notice this part in the output from `str(ortologos_filtrados)`: `$Gene.ID : int 115709372 115716460 …
Votes
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
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