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VariantFiltering
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library VaraintFiltration looking for explanation of pedigree file
bioconductor
variantfiltering
6.6 years ago
Claus.Hultschig
• 0
3
votes
2
replies
1.4k
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filtering VCF files
variantannotation
variantfiltering
updated 7.0 years ago by
Michael Lawrence
★ 11k • written 7.0 years ago by
Bogdan
▴ 670
0
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1
reply
318
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VariantFiltering error
VariantFiltering
updated 9 months ago by
Robert Castelo
★ 3.1k • written 9 months ago by
Andrew Beggs
▴ 90
0
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1
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1.1k
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Problems with autosomalRecessiveHomozygous
VariantFiltering
8.7 years ago
claire.simpson
• 0
0
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1
reply
1.4k
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Confused about understanding the output and statistics of BAM file after STAR aligning
RNAseq123
VariantFiltering
Alignment
VariantAnnotation
updated 16 months ago by
James W. MacDonald
65k • written 17 months ago by
Mohamed
▴ 30
1
vote
1
reply
1.3k
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retrieving phastConsScores via 'scores' from 'VariantFiltering' shows inconsistency
variantfiltering
phastcons
updated 8.9 years ago by
Robert Castelo
★ 3.1k • written 8.9 years ago by
Stefanie Tauber
▴ 40
0
votes
0
replies
405
views
Variant Filtering on very large VCF files
VariantAnnotation
VariantFiltering
6 months ago
Bogdan
▴ 670
4
votes
0
replies
1.5k
views
News:
Hands-on Bioconductor course, 7 Sept 2015, Tokyo
sequencing
transcription
variantfiltering
annotation
News
8.8 years ago
Matthew Ritchie
▴ 1000
0
votes
0
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1.7k
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problems installing VariantFiltering package
VariantFiltering
VariantFiltering
9.9 years ago
Robert Castelo
★ 3.1k
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Answer: New genes that did not exist in dds object suddenly showed up after degPatterns
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Michael Love
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May be documented by the software you are using? https://github.com/lpantano/DEGreport
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Michael Love
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Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
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This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
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Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
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transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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