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warning: example doesn't exist; while trying to build a package
bioconductor
package development
R
roxygen2
warning
6.5 years ago
clarisbaby
• 0
3
votes
3
replies
2.0k
views
Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chunk
rmarkdown
suppressWarning
warning
updated 14 months ago by
Mike Smith
★ 6.5k • written 2.4 years ago by
Wolfgang Huber
★ 13k
0
votes
9
replies
2.2k
views
R-devel - BiocGenerics - Warning: multiple methods tables found for which
BioGenerics
warning
3.9 years ago • updated 3.8 years ago
ullrich
▴ 20
0
votes
1
reply
2.1k
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reading text file in R
warning
text
read.delim
updated 6.8 years ago by
Gordon Smyth
50k • written 6.8 years ago by
niutster
• 0
6
votes
3
replies
2.6k
views
How to solve "WARNING: Add non-empty \value" with roxygen tags
bioccheck
roxygen2
warning
bioc-devel
package development
updated 6.5 years ago by
Lluís Revilla Sancho
▴ 730 • written 6.5 years ago by
Paul Brennan
▴ 10
2
votes
1
reply
1.2k
views
Warnings messages can not we handles/hidden
warning message
warning
R
rhdf5
updated 7.8 years ago by
Martin Morgan
25k • written 7.8 years ago by
matiasb
• 0
0
votes
3
replies
970
views
PureCN warning: test.num.copy outside recommended range
PureCN
Warning
updated 6.0 years ago by
markus.riester
▴ 130 • written 6.0 years ago by
twtoal
▴ 10
5
votes
4
replies
1.3k
views
CMD check warning using Bioconductor as a source for the dependencies of an R package
Bioconductor
CMD check
warning
updated 5.2 years ago by
Martin Morgan
25k • written 5.2 years ago by
dong
▴ 10
2
votes
8
replies
2.4k
views
DelayedArray loading Warning causes stop in Bioconductor 3.12
DelayedArray
warning
installation
updated 3.9 years ago by
Hervé Pagès
16k • written 3.9 years ago by
inzirio
▴ 10
0
votes
1
reply
1.8k
views
makeTxdbfromUCSC Warning message
MakeTXDCfromUCSC
GenomicFeatures
warning
updated 8.7 years ago by
Marc Carlson
★ 7.2k • written 8.7 years ago by
Lillyhchen
▴ 10
3
votes
2
replies
1.9k
views
DEXSeq throws a warning - rank-deficient matrix
dexseq
fit
matrix
warning
updated 2.4 years ago by
koushik
• 0 • written 7.2 years ago by
Assa Yeroslaviz
★ 1.5k
11 results • Page
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Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
by
Michael Love
41k
Sounds reasonable. For ranking genes, you could choose those with low decay rate but removing thoses where it is indistinguishable from …
Answer: Citation for edgeR user guide
by
Gordon Smyth
50k
Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You are just making up data? What is the point of this exercise?
Comment: How to retrieve gene ontology GO class?
by
James W. MacDonald
65k
What do you mean by 'the information'? Do you have things in particular that you want?
Comment: minfi::read.metharray.exp
by
clacarion
• 0
I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…
Votes
Answer: Citation for edgeR user guide
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
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