updated 6.0 years ago by
Rory Stark
★
4.6k
•
written 6.0 years ago by
BioinfGuru
▴
20
0
votes
1
reply
1.1k
views
Recent ...
Replies
Answer: Correct script for featurecounts in Rsubread
by
James W. MacDonald
62k
Here's the relevant section from `?featureCounts`
```
Value:
A list with the following components:
counts: a data matrix c…
Comment: Can I run DESeq2 with SMART-Seq data
by
Assa Yeroslaviz
★
1.5k
thanks, the filter is the other way around, true 🙈
Comment: Can I run DESeq2 with SMART-Seq data
by
Assa Yeroslaviz
★
1.5k
I haven't seen this part before. Thanks for pointing it out.
Answer: Can I run DESeq2 with SMART-Seq data
by
Michael Love
39k
There should be no problem to run DESeq2.
You can leave the filtering to `results()` or, better, use IHW.
Your filter looks wrong, it…
Comment: Can I run DESeq2 with SMART-Seq data
by
ATpoint
★
2.4k
The choice of preprocessing is on you. There are a variety of benchmark papers and preprints you can get guidance from.
Towards prefilteri…
Awards
• All
Popular Question to
Michael Love
39k
Popular Question to
Assa Yeroslaviz
★
1.5k
Popular Question to
Guido Hooiveld
★
3.6k
Scholar to
Gordon Smyth
47k
Popular Question to
Robert Castelo
★
3.0k
Locations
• All
Germany, 1 minute ago
United States, 3 minutes ago
Canada, 3 minutes ago
Brazil, 4 minutes ago
University of Zurich, Switzerland, 15 minutes ago
Germany, 1 minute ago
United States, 3 minutes ago
Canada, 3 minutes ago
Brazil, 4 minutes ago
University of Zurich, Switzerland, 15 minutes ago
Traffic: 623 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6