Showing : affxparser • reset
1
vote
10
replies
5.0k
views
Rsubread package not available? Warning resolved
affxparser Rsubread BiocInstaller affxparser Rsubread BiocInstaller
updated 12.4 years ago by ★ 3.6k • written 12.4 years ago by ▴ 20
3
votes
8
replies
2.3k
views
Error aroma.affymetrix [affxparser Fusion SDK exception]
affymetrix affxparser
updated 8.4 years ago by ★ 2.4k • written 8.4 years ago by ▴ 40
0
votes
7
replies
1.7k
views
Install error affxparser for R 2.15
PROcess affxparser BiocInstaller PROcess affxparser BiocInstaller
updated 12.0 years ago by ★ 8.2k • written 12.0 years ago by ▴ 60
0
votes
7
replies
1.7k
views
affxparser updateCelUnit question
Microarray hgu133a2 affxparser Microarray hgu133a2 affxparser
12.8 years ago Martha Behnke ▴ 100
0
votes
5
replies
1.4k
views
errors with attempted installation of package affxparser
GO affxparser GO affxparser
updated 15.7 years ago by ★ 6.5k • written 15.7 years ago by ▴ 830
0
votes
4
replies
3.9k
views
how to use R read CHP file
affy affxparser affy affxparser
updated 18.4 years ago by ▴ 20 • written 18.4 years ago by ▴ 40
0
votes
4
replies
1.5k
views
scan date information
affxparser affxparser
updated 14.6 years ago by ▴ 400 • written 14.6 years ago by ▴ 10
0
votes
4
replies
1.2k
views
problem using affxparser on MacOSX
affxparser affyILM affxparser affyILM
updated 12.4 years ago by ▴ 410 • written 12.4 years ago by ▴ 20
0
votes
3
replies
976
views
CLF/PGF parser
Microarray Cancer affy affxparser Microarray Cancer affy affxparser
updated 16.9 years ago by 65k • written 16.9 years ago by ★ 6.5k
0
votes
3
replies
1.7k
views
readChp (affxparser) segfaults
SNP cdf affxparser SNP cdf affxparser
updated 15.0 years ago by ★ 6.5k • written 15.0 years ago by ▴ 60
0
votes
2
replies
1.2k
views
makePDPackage problem? -- Affy promoter arrays
affy affxparser affy affxparser
15.7 years ago Mark Robinson ★ 1.1k
0
votes
2
replies
1.4k
views
ReadAffy crashes on mac
Preprocessing affy convert affxparser affyio BUS Preprocessing affy convert affxparser
updated 15.7 years ago by ★ 1.2k • written 15.7 years ago by ▴ 40
0
votes
2
replies
1.6k
views
makecdfenv package bug
cdf affy affxparser oligo cdf affy affxparser oligo
updated 9.9 years ago by ▴ 10 • written 9.9 years ago by 65k
0
votes
2
replies
1.4k
views
Affxparser: warning creating cel file from AffyBatch
cdf affy affxparser cdf affy affxparser
14.2 years ago Guido Hooiveld ★ 3.9k
0
votes
2
replies
1.9k
views
Problem loading the "affxparser" dependency of the "oligo" package.
affxparser oligo affxparser oligo
updated 11.1 years ago by ▴ 20 • written 11.1 years ago by ★ 2.4k
0
votes
2
replies
824
views
R Bioconductor package Affxparser keeps crashing
affxparser r Bioconductor
updated 22 months ago by 65k • written 22 months ago by • 0
1
vote
2
replies
1.4k
views
create Affymetrix .chp file for viewing in affy Integrated Genome Browser
affy affxparser affy affxparser
16.0 years ago Shi, Tao ▴ 720
0
votes
2
replies
1.4k
views
Affxparser: how to create CEL-file from AffyBatch
cdf affxparser Harshlight cdf affxparser Harshlight
updated 15.8 years ago by 65k • written 15.8 years ago by ★ 3.9k
0
votes
1
reply
1.0k
views
affxparser and GCC 4.3
affxparser affxparser
updated 15.7 years ago by ★ 2.4k • written 15.7 years ago by ★ 6.5k
0
votes
1
reply
868
views
affxparser: bug fix in Bioc 2.0
affxparser affxparser
16.8 years ago Kasper Daniel Hansen ★ 6.5k
0
votes
1
reply
740
views
unclear on error in affxparser
cdf affxparser cdf affxparser
updated 16.5 years ago by ★ 6.5k • written 16.5 years ago by ▴ 210
0
votes
1
reply
983
views
Question on Affxparser (createCel)
affxparser affxparser
updated 15.7 years ago by ★ 2.4k • written 15.7 years ago by ★ 3.9k
0
votes
1
reply
1.3k
views
Prokaryotic_Rhodobacter capsulatus GEP
Epigenetics cdf affy makecdfenv plier affxparser preprocessCore Epigenetics cdf affy
updated 15.4 years ago by ▴ 140 • written 15.4 years ago by 65k
0
votes
1
reply
1.0k
views
Reading function for Affymetrix BAR-Files
affxparser affxparser
updated 14.8 years ago by 21k • written 14.8 years ago by ▴ 20
0
votes
0
replies
1.1k
views
回复: Re: fRMA package
affxparser frma GenomicRanges affxparser frma GenomicRanges
10.7 years ago Hanyine ▴ 30
0
votes
0
replies
902
views
readChp in affxparser
affxparser affxparser
15.3 years ago Henrik Bengtsson ★ 2.4k
0
votes
0
replies
1.3k
views
Sc03b_MR_v04 CDF package
BiocViews Genetics Yeast cdf probe affy affxparser biocViews oligo pdInfoBuilder Yeast
15.6 years ago Ludo Muller ▴ 50
0
votes
0
replies
1.0k
views
Question about 'updateCel' from package 'affxparser'
cdf PROcess affxparser cdf PROcess affxparser
12.7 years ago Henrik Bengtsson ★ 2.4k
0
votes
0
replies
1.1k
views
affxparser compile error on mac
affxparser affxparser
16.9 years ago Mark Robinson ★ 1.1k
0
votes
0
replies
770
views
affyio package usage
affxparser affyio affxparser affyio
17.2 years ago Seth Falcon ★ 7.4k
0
votes
0
replies
889
views
bugfix in affxparser for BioC release 1.9
cdf affxparser cdf affxparser
17.5 years ago Kasper Daniel Hansen ★ 6.5k
0
votes
0
replies
1.5k
views
Missing probesets when creating Affymetrix GeneChip miRNA 4.0 CDF package using makecdfenv package
miRNA cdf affy makecdfenv affxparser miRNA cdf affy makecdfenv affxparser
10.3 years ago James W. MacDonald 65k
0
votes
0
replies
781
views
affxparser users: bug fix in BioC 1.8
affxparser affxparser
17.9 years ago Kasper Daniel Hansen ★ 6.5k
0
votes
0
replies
1.4k
views
FW: fRMA package
affxparser frma GenomicRanges affxparser frma GenomicRanges
10.7 years ago Li Liu ▴ 100
0
votes
0
replies
1.1k
views
segfault when trying to convert hta20_Hs_ENSE_22.cdf to binary format
affxparser cdf hta2.0
6.8 years ago relathman ▴ 20
0
votes
0
replies
1.1k
views
Creating Affymetrix CDF files
cdf affxparser cdf affxparser
15.2 years ago Henrik Bengtsson ★ 2.4k
36 results • Page 1 of 1
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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0
Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…
Answer: Reproducibility issue with scran together with lapply and BiocParallel by Aaron Lun ★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by shuwangxinze1996 • 0
Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough? Thank …
Votes
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
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Answer: How to retrieve gene ontology GO class from gene list?
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