Showing : affylmgui • reset
1
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6
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1.2k
views
Error while running affylmGUI
microarray limma affy affylmGUI
updated 5.2 years ago by 50k • written 5.2 years ago by • 0
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votes
0
replies
1.0k
views
Issues running affylmGUI
Cancer Breast affylmGUI Cancer Breast affylmGUI
13.4 years ago Lorenzo Melchor ▴ 50
0
votes
0
replies
711
views
affylmGUI problem with tkcmd
affylmGUI affylmGUI
17.4 years ago Wonjong Moon ▴ 80
0
votes
2
replies
874
views
affylmGUI problem with tkcmd
affylmGUI affylmGUI
updated 17.4 years ago by ▴ 80 • written 17.4 years ago by ★ 7.4k
0
votes
0
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1.1k
views
BioC GUI development
Microarray Genetics GUI affy limma affylmGUI limmaGUI Microarray Genetics GUI affy
20.4 years ago James Wettenhall ▴ 1000
0
votes
0
replies
610
views
Re: affylmGUI figures estrogen data set
GO affylmGUI GO affylmGUI
20.0 years ago James Wettenhall ▴ 1000
0
votes
2
replies
871
views
affylmGUI
drosgenome1 affylmGUI drosgenome1 affylmGUI
updated 20.0 years ago by ▴ 1000 • written 20.0 years ago by ▴ 180
0
votes
1
reply
722
views
Is rma in affylmGUI different to affy rma?
affy affylmGUI affy affylmGUI
20.0 years ago Simon Kidd ▴ 180
0
votes
0
replies
906
views
limmaGUI & affylmGUI wizards for Windows & bug fixes
Microarray Genetics cdf affylmGUI limmaGUI Microarray Genetics cdf affylmGUI limmaGUI
19.9 years ago James Wettenhall ▴ 1000
0
votes
0
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740
views
gcrma in affylmGUI
gcrma affylmGUI limmaGUI gcrma affylmGUI limmaGUI
19.9 years ago James Wettenhall ▴ 1000
0
votes
0
replies
1.0k
views
Re: affylmGUI
Genetics affylmGUI limmaGUI convert Genetics affylmGUI limmaGUI convert
19.9 years ago James Wettenhall ▴ 1000
0
votes
1
reply
910
views
Anopheles/malaria Affy chips
affy simpleaffy affylmGUI affy simpleaffy affylmGUI
updated 19.9 years ago by ▴ 950 • written 19.9 years ago by ▴ 510
0
votes
1
reply
750
views
affylmGUI
affylmGUI affylmGUI
updated 19.9 years ago by ▴ 1000 • written 19.9 years ago by ▴ 120
0
votes
0
replies
729
views
three way comparisons with affylmgui
affylmGUI affylmGUI
19.9 years ago Simon Kidd ▴ 180
0
votes
3
replies
1.2k
views
Error in parse() loading affylmGUI
affylmGUI affylmGUI
updated 19.9 years ago by ▴ 1000 • written 19.9 years ago by ▴ 340
0
votes
1
reply
1.0k
views
loading CEL files in affylmGUI
Annotation affylmGUI Annotation affylmGUI
updated 19.8 years ago by ▴ 1000 • written 19.8 years ago by ▴ 60
0
votes
0
replies
671
views
affylmGUI fix (topTable/CDF name)
Annotation cdf affylmGUI Annotation cdf affylmGUI
19.8 years ago James Wettenhall ▴ 1000
0
votes
1
reply
1.0k
views
Re: Limma GUI exporting
Microarray limma affylmGUI limmaGUI Microarray limma affylmGUI limmaGUI
19.8 years ago James Wettenhall ▴ 1000
0
votes
0
replies
651
views
affylmGUI multiget
affylmGUI affylmGUI
19.8 years ago James Wettenhall ▴ 1000
0
votes
0
replies
645
views
affy and limma
Normalization affy affylmGUI convert Normalization affy affylmGUI convert
19.6 years ago Gareth Elvidge ▴ 10
0
votes
0
replies
679
views
affy and limma
Normalization affy affylmGUI convert Normalization affy affylmGUI convert
19.6 years ago Gordon Smyth 50k
0
votes
4
replies
1.5k
views
tkrplot in R2.0 on Mac OS X
affylmGUI affylmGUI
updated 19.4 years ago by ▴ 1000 • written 19.4 years ago by ▴ 100
0
votes
0
replies
659
views
Affymetrix CDF package
cdf affylmGUI cdf affylmGUI
19.3 years ago MShingyoji@lbl.gov ▴ 10
0
votes
2
replies
899
views
affylmGUI error when normalizing
Microarray Normalization affylmGUI Microarray Normalization affylmGUI
updated 19.2 years ago by ▴ 1000 • written 19.2 years ago by ▴ 30
0
votes
1
reply
629
views
Please help: AffylmGUI errors
Microarray affylmGUI ASSIGN Microarray affylmGUI ASSIGN
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 30
0
votes
0
replies
695
views
affylmGUI - feedback, questions
gcrma GeneSpring affylmGUI gcrma GeneSpring affylmGUI
19.2 years ago SteffenMöller ▴ 30
0
votes
0
replies
871
views
Please help: AffylmGUI errors (more detail)
Normalization hgu133a affylmGUI ASSIGN Normalization hgu133a affylmGUI ASSIGN
19.2 years ago Aaron Hamilton ▴ 30
0
votes
0
replies
586
views
Re: [Bioc-devel] Error in mget(ls(cdfenv), env = rgu34aGENENAME) : Object "rgu34aGENENAME" not found
Annotation GO affylmGUI Annotation GO affylmGUI
19.1 years ago James Wettenhall ▴ 1000
0
votes
0
replies
531
views
AffylmGUI Comparisons and Filtering
Microarray affylmGUI Microarray affylmGUI
18.9 years ago Quentin Anstee ▴ 110
0
votes
3
replies
1.2k
views
Defining and handling replicates
GO affy limma affylmGUI GO affy limma affylmGUI
updated 18.9 years ago by 50k • written 18.9 years ago by ▴ 70
0
votes
0
replies
998
views
Question (vennDiagram vs. topTable) + Patch (plotTitle for vennDiagram) for AffylmGUI 1.3.0
affylmGUI affylmGUI
18.9 years ago Steffen Moeller ▴ 40
0
votes
5
replies
1.5k
views
Problem with Installing affylmGUI on MAC OS X
Cancer affylmGUI Cancer affylmGUI
18.8 years ago Richard Friedman ★ 2.0k
0
votes
0
replies
691
views
error message in affylmGUI on PC
Cancer affylmGUI Cancer affylmGUI
18.8 years ago Richard Friedman ★ 2.0k
0
votes
0
replies
790
views
Error messages in affylmGUI on PC with respect to plotting
Cancer limma affyPLM affylmGUI Cancer limma affyPLM affylmGUI
18.8 years ago Richard Friedman ★ 2.0k
0
votes
3
replies
901
views
Error messages in affylmGUI on PC with respect to plotting
limma affyPLM affylmGUI limma affyPLM affylmGUI
18.8 years ago Seth Falcon ★ 7.4k
0
votes
0
replies
754
views
Analisys with MAS5 and affyPLM
affylmGUI affylmGUI
18.8 years ago Pedro Botías ▴ 80
0
votes
1
reply
795
views
FW: Question (vennDiagram vs. topTable) for AffylmGUI 1.3.0
GO limma affylmGUI GO limma affylmGUI
updated 18.6 years ago by 50k • written 18.6 years ago by ▴ 50
0
votes
1
reply
833
views
Access to Affy chip annotation data in affylmGUI
mouse4302 affylmGUI mouse4302 affylmGUI
updated 18.3 years ago by ★ 7.4k • written 18.3 years ago by ▴ 10
0
votes
0
replies
928
views
Request for users of limmaGUI, affylmGUI, JSM2005 or IBC2004 microarray course websites or my R-Tcl/Tk examples
affylmGUI limmaGUI affylmGUI limmaGUI
18.2 years ago James Wettenhall ▴ 1000
0
votes
0
replies
493
views
AffylmGUI
affylmGUI affylmGUI
18.0 years ago Gordon Smyth 50k
0
votes
0
replies
907
views
LimmaGUI for illumina data
GUI limma affylmGUI limmaGUI GUI limma affylmGUI limmaGUI
17.9 years ago Roy Williams ▴ 10
0
votes
0
replies
975
views
LimmaGUI for illumina data
GUI affy limma affylmGUI limmaGUI beadarray GUI affy limma affylmGUI limmaGUI beadarray
17.9 years ago Mark Dunning ▴ 320
0
votes
3
replies
1.0k
views
Using CDF file on affylmGUI
Proteomics GO affylmGUI Proteomics GO affylmGUI
updated 17.4 years ago by ▴ 450 • written 17.4 years ago by ▴ 70
0
votes
5
replies
1.2k
views
CDF/Probe/Annotation for GNF1m custom chip
cdf probe affylmGUI cdf probe affylmGUI
updated 17.1 years ago by ★ 6.5k • written 17.1 years ago by ▴ 830
0
votes
0
replies
2.7k
views
[Bioc-devel] Tcl/TK pckage "Bwidget"
affylmGUI limmaGUI affylmGUI limmaGUI
17.0 years ago Keith Satterley ▴ 450
0
votes
0
replies
750
views
affylmGUI ver 1.10.2 bug fix in release branch
affylmGUI affylmGUI
16.9 years ago Keith Satterley ▴ 450
0
votes
3
replies
1.3k
views
limma gene symbol not avialable problem
cdf affy affydata limma affylmGUI affyio cdf affy affydata limma affylmGUI affyio
updated 16.9 years ago by 65k • written 16.9 years ago by ▴ 450
0
votes
0
replies
584
views
affylmGUI 1.10.4 fixes 3 errors in Bioconductor release version
affylmGUI affylmGUI
16.8 years ago Keith Satterley ▴ 450
0
votes
1
reply
1.1k
views
An error of affylmGUI
cdf affy affylmGUI affyio cdf affy affylmGUI affyio
updated 16.7 years ago by ▴ 450 • written 16.7 years ago by ▴ 450
0
votes
0
replies
727
views
affylmGUI: options for 'Export HTML Report'?
PROcess affylmGUI PROcess affylmGUI
16.6 years ago Keith Satterley ▴ 450
50 results • Page 1 of 1
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Comment: get BM error by Fara • 0
Thank you for the reply. The examples are these. ENSGACG00000014473 ENSGACG00000015168 ENSGACG00000007529
Comment: get BM error by Mike Smith ★ 6.5k
Can you provide an example of the Ensemble IDs you're trying to convert?
Comment: How to retrieve gene ontology GO class? by bandconductor • 0
Sorry I wasn't clear before. What I mean is the all the information associated with the go term, such as description and evidence. I have …
Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0
How am i making the data? I am using the DESeq2 output data which I had generated
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq by Michael Love 41k
Sounds reasonable. For ranking genes, you could choose those with low decay rate but removing thoses where it is indistinguishable from …
Votes
Comment: get BM error
Answer: Citation for edgeR user guide
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
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