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airway
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1
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2
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airway package not compatible with R version 4.1.2 (2021-11-01)
airway
updated 2.2 years ago by
ATpoint
★ 4.0k • written 2.2 years ago by
j.jacob1
• 0
0
votes
1
reply
665
views
RNA-Seq Workflow Vignette - library(airway) Missing "quants" directory
RNASeq
DESeq2
airway
updated 2.4 years ago by
Michael Love
41k • written 2.4 years ago by
dmbergau
• 0
5
votes
8
replies
1.0k
views
Tibble error when installing bioconductor "airways"
airway
4.1 years ago
brest
• 0
0
votes
2
replies
1.3k
views
Is there a data package containing complex RNA-Seq data?
RNAseqdataset
airway
deseq2
rangedsummarizedexperiment
rnaseqgene
updated 6.1 years ago by
mario.zanfardino
▴ 160 • written 6.1 years ago by
ap3637
• 0
1
vote
5
replies
3.8k
views
installation of "airway" had non-zero exit status
airway
updated 7.2 years ago by
Martin Morgan
25k • written 7.2 years ago by
liyi983923
• 0
1
vote
3
replies
5.4k
views
package ‘airway’ is not available (for R version 3.2.2)
airway
updated 8.4 years ago by
Dan Tenenbaum
★ 8.2k • written 8.4 years ago by
jmmonroykuhn
• 0
0
votes
1
reply
1.1k
views
error in bioc2015rnaseq tutorial
deseq2
airway
updated 8.7 years ago by
Michael Love
41k • written 8.7 years ago by
pcantalupo
▴ 10
7 results • Page
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Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Chris
• 0
Thanks Robert!
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Robert Castelo
★ 3.2k
Hi, your `c2` object storing all the gene sets is probably a `list` object, where element names are the names of the pathways given by MSig…
Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
lonn
• 0
I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
Answer: Cannabis and KEGGgraph
by
deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Votes
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
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