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Bioconductor ALL

10 months ago simone.tiberi • 0

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ALL The DifferentialRegulation PathNet

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updated 21 months ago by James W. MacDonald 65k • written 21 months ago by xxxsarahkimxxx • 0

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biocLite update all default ask

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bioconductor ALL linear model

updated 5.7 years ago by Gordon Smyth 50k • written 5.7 years ago by detroit.drive • 0

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ALL bioconductor biobase exprs

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updated 7.4 years ago by Marcel Ramos 690 • written 7.4 years ago by mdfislam89 • 0

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installation packages bioconductor all

updated 8.4 years ago by Martin Morgan 25k • written 8.4 years ago by av • 0

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Answer: Citation for edgeR user guide by Gordon Smyth 50k

Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…

Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k

You are just making up data? What is the point of this exercise?

Comment: How to retrieve gene ontology GO class? by James W. MacDonald 65k

What do you mean by 'the information'? Do you have things in particular that you want?

Comment: minfi::read.metharray.exp by clacarion • 0

I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…

Comment: minfi::read.metharray.exp by clacarion • 0

Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…

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Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)

Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.

Answer: minfi::read.metharray.exp

Comment: Trying to use enrichGO

Answer: Cannabis OrgDb

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