Bioconductor Allelicimbalance

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DESeq2 AllelicImbalance edgeR RNASeq

updated 2.8 years ago by Michael Love 41k • written 2.8 years ago by Katya • 0

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2.1k

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edger allelicimbalance

8.0 years ago ugwu.nelson ▴ 10

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971

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AllelicImbalance

updated 8.5 years ago by lasfol ▴ 10 • written 8.5 years ago by sannysandra93 • 0

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1.4k

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allelicimbalance

updated 8.9 years ago by Jesper Robert Gadin ▴ 20 • written 9.1 years ago by JK ▴ 10

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1.3k

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allelicimbalance

updated 8.9 years ago by Jesper Robert Gadin ▴ 20 • written 9.2 years ago by JK ▴ 10

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allelicimbalance getallelecounts

updated 9.2 years ago by Valerie Obenchain ★ 6.8k • written 9.2 years ago by JK ▴ 10

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1.1k

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allelicimbalance

updated 9.3 years ago by Martin Morgan 25k • written 9.3 years ago by JK ▴ 10

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1.4k

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RNASeq Cancer trio AllelicImbalance RNASeq Cancer trio AllelicImbalance

updated 10.3 years ago by Jesper Robert Gadin ▴ 20 • written 10.3 years ago by Tim Triche, Jr. ▴ 10

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Comment: Reading huge bismark coverage files using bbseq::read.bismark by Peter Hickey ▴ 690

Superficially, your issue is similar to [https://github.com/hansenlab/bsseq/issues/136](https://github.com/hansenlab/bsseq/issues/136). You…

Answer: Reading huge bismark coverage files using bbseq::read.bismark by Peter Hickey ▴ 690

I'm one of the **bsseq** developers. Are you able to share one of your files with me (e.g., via Dropbox, Google Drive, OneDrive, etc.). Tha…

Comment: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var by daniel.carbajo • 0

Yeah I think this is the way to go! How can I pass `col_list` here though? `Heatmap` does not accept a list of color vectors... How can I m…

Answer: The issue with SGSeq_analyzeFeatures() returns errors on BAM files by kamryncole1963 • 0

https://support.bioconductor.org/p/85837/[tunnel rush][1] Refer to this link, it may help. [1]: https://tunnelrush3.com

Comment: flowStats Search Error by SamGG ▴ 350

So do I. The direct URL is https://bioconductor.org/packages/3.18/bioc/html/flowStats.html

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Answer: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var