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altcdfenvs
•
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0
votes
4
replies
1.3k
views
probe --> probe set mapping in CDF library files
cdf
probe
altcdfenvs
cdf
probe
altcdfenvs
17.9 years ago
michael driscoll
▴ 30
2
votes
3
replies
1.1k
views
How to create vectors (makeVectorsAffyBatch) , using own cdf
affymetrix microarrays
frmatools
altcdfenvs
updated 6.1 years ago by
Matthew McCall
▴ 830 • written 6.1 years ago by
osieman52
• 0
0
votes
0
replies
1.0k
views
Converting makeProbePackage in AnnotationDbi to permit PM-only arrays
cdf
probe
affy
altcdfenvs
cdf
probe
affy
altcdfenvs
12.8 years ago
Ariel Grostern
▴ 80
0
votes
1
reply
973
views
Small bug in function 'countskip.FASTA.entries' from package 'altcdfenvs'
probe
affy
makecdfenv
matchprobes
altcdfenvs
probe
affy
makecdfenv
matchprobes
altcdfenvs
updated 18.4 years ago by
lgautier@altern.org
▴ 950 • written 18.4 years ago by
Norman Pavelka
▴ 190
0
votes
0
replies
950
views
FW: makecdfenv()
GO
cdf
PROcess
altcdfenvs
GO
cdf
PROcess
altcdfenvs
19.7 years ago
Lana Schaffer
▴ 80
0
votes
1
reply
947
views
Mapping CDF from different array platforms
cdf
affy
altcdfenvs
cdf
affy
altcdfenvs
updated 18.6 years ago by
Sean Davis
21k • written 18.6 years ago by
Rifat Hamoudi
▴ 30
0
votes
1
reply
929
views
error msg for probe match (altcdfenvs)
probe
altcdfenvs
probe
altcdfenvs
updated 13.4 years ago by
Laurent Gautier
★ 2.3k • written 13.4 years ago by
Jack Luo
▴ 440
0
votes
1
reply
902
views
Creating a CDFenv without cdf file
altcdfenvs
altcdfenvs
updated 18.4 years ago by
lgautier@altern.org
▴ 950 • written 18.4 years ago by
Nicholas Lewin-Koh
▴ 430
0
votes
0
replies
892
views
RE: altcdfenvs error
cdf
probe
altcdfenvs
cdf
probe
altcdfenvs
19.0 years ago
Wu, Xiwei
▴ 350
0
votes
0
replies
888
views
Resend: altcdfenvs: mapping probes and creating new probe sets: guidance requested
cdf
probe
affy
altcdfenvs
cdf
probe
affy
altcdfenvs
12.8 years ago
Ariel Grostern
▴ 80
0
votes
0
replies
868
views
affy: adding new probe set definitions and making rma expression summaries
probe
affy
altcdfenvs
probe
affy
altcdfenvs
18.7 years ago
Mette Langaas
▴ 10
0
votes
1
reply
844
views
altcdfenvs: mapping probes and creating new probe sets: guidance requested
cdf
probe
affy
altcdfenvs
cdf
probe
affy
altcdfenvs
updated 12.8 years ago by
James W. MacDonald
65k • written 12.8 years ago by
Ariel Grostern
▴ 80
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mercedeh.movassagh
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Yes that is correct
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It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
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This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
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It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
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I already know that you using CEL files because you need them to perform RMA normalization. Yes, you should follow the advice I have alread…
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Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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