Bioconductor Alternative splicing

Showing : alternative splicing • reset

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3.0k

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sgseq splicing alternative splicing

updated 8.8 years ago by Leonard Goldstein ▴ 260 • written 8.8 years ago by vakul.mohanty ▴ 20

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1.7k

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rna-seq alternative splicing SGSeq

6.1 years ago andrea.bast • 0

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2.4k

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DEXSeq DESeq2 dexseq deseq2 alternative splicing

9.2 years ago Fahmi Nazarie • 0

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1.2k

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sgseq alternative splicing rna seq

updated 4 months ago by Sara • 0 • written 5.1 years ago by 116100016 • 0

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1.5k

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limma rna-seq alternative splicing

updated 7.2 years ago by Gordon Smyth 52k • written 7.2 years ago by lirongrossmann ▴ 80

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987

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rna seq SGSeq Alternative splicing

updated 5.2 years ago by Leonard Goldstein ▴ 260 • written 5.2 years ago by 116100016 • 0

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1.5k

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maser R rMATs alternative splicing

6.3 years ago Reza • 0

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1.2k

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aspli readCounts rna-seq alternative splicing AS

5.8 years ago fernandalpcosta ▴ 10

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2.0k

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dexseq alternative splicing exon skipping

updated 9.8 years ago by Simon Anders ★ 3.8k • written 9.8 years ago by ebadr • 0

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1.2k

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deseq2 dexseq alternative splicing

updated 9.0 years ago by Michael Love 43k • written 9.1 years ago by sahiilseth • 0

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1.0k

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R alternative splicing ASpli AsDiscover

6.0 years ago abdul rawoof ▴ 60

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1.1k

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rnaseq alternative splicing ASpli

6.1 years ago nicolas.guyon2 • 0

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1.3k

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limma voom alternative splicing

8.8 years ago osa.zuta ▴ 40

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859

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psichomics SUPPA Splicing Alternative Splicing Retained Introns

4.2 years ago noahhelton98 ▴ 20

14 results • Page 1 of 1

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Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by daldabrown9 • 0

For more info visit us on [R350 status check][1] [1]: https://sassagrantstatuscheck.co.za/

Answer: Margins for gene_set_enrichment_plot by Leonardo Collado Torres ★ 1.1k

Hi, In version 1.19.4 of `spatialLIBD` @lahuuki re-implemented the `gene_set_enrichment_plot()` function using `ComplexHeatmap::Heatmap(…

Comment: miRTarRnaseq library by mercedeh.movassagh ▴ 20

Maria please read the mirTarRnaSeq paper. In particular, Supplemental Table 2, clarifies all the statistical models, inputs and outputs. If…

Comment: Help using rtracklayer for gene ID extraction by James W. MacDonald 67k

Telling me you can't do something without showing what you tried is not helpful. When posting here, try to put yourself in the shoes of peo…

Comment: miRTarRnaseq library by María Calvo • 0

Hello Mercedeh, excuse me for not explaining it adecuately, Im using the "Part3 - Identify significant miRNA mRNA relationships for 2 time …

Votes

Whether to build DESeq2 model with all data and then contrast groups or subset groups first, build model and then contrast?

Answer: Feature Counts - potential bug with outfile.jcounts

Answer: Pre-filtering TPM kallisto for ssGSEA / DESeq2

Answer: Mapping Between GenBank ID's and Uniprot

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