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Bioconductor Cloud AMI - How to Access Microarray Files Stored in Amazon S3 Buckets?
amazon
bioconductor aws
s3
oligo package
affybatch
6.0 years ago
perdedorium
• 0
2
votes
6
replies
1.5k
views
Enable copying Bioconductor AMI to new region
aws
bioconductor aws
ami
amazon
updated 6.5 years ago by
shepherl
3.8k • written 6.5 years ago by
neal
▴ 10
5
votes
2
replies
2.6k
views
Copying Amazon Bioconductor AMI to another zone
amazon
cloud
updated 7.5 years ago by
Valerie Obenchain
★ 6.8k • written 7.5 years ago by
Thomas Sandmann
▴ 90
0
votes
2
replies
1.6k
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How to launch a preconfigured Bioconductor AMI session using the free tier with RStudio Server?
bioconductor
amazon
ami
cloud
updated 7.8 years ago by
shepherl
3.8k • written 7.8 years ago by
kdkorthauer
• 0
0
votes
2
replies
1.4k
views
Help with AMI hosted on bioconductor page, ami-a3d126c8
BiocParallel
amazon
8.7 years ago
nitesh.turaga
▴ 140
5 results • Page
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Comment: How to tell and visualize up/down regulation of pathways from clusterprofiler gs
by
Guangchuang Yu
★ 1.2k
an example is also presented in <https://pubmed.ncbi.nlm.nih.gov/34557778/>.
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
Nothing would prevent you from using the `enrichGO` function (or any other function for over-representation analysis [ORA]) with only 14 ge…
Comment: Different Shrunk Log2FC according with reference
by
andrebolerbarros
▴ 20
Thanks @atpoint for your answer! The issue with that is then it severely hinders the possiblity of using `apeglm` shrinking approach, sinc…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
by
ATpoint
★ 4.0k
The error that is relevant is `Aborted (core dumped)`. This line 2890 refers to the C source code that throws the error, it is not relevant…
Answer: Different Shrunk Log2FC according with reference
by
ATpoint
★ 4.0k
Please see: https://support.bioconductor.org/p/p134551/ I asked basically the same before. In short, reference level might have an influ…
Votes
C: SGSeq: moving toward diffex from SGSeq analysis
DEXSeq-Error in FUN(X[[i]], ...) : subscript out of bounds
Subset DEXSeqDataSet In DEXSeq
How to get all possible comparisons in DiffBind
Comment: get BM error
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ATpoint
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Gordon Smyth
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i.sudbery
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shepherl
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