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ami
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5
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SGE backend on Bioc AMI with Starcluster not recognising CPUs
ami
starcluster
biocparallel
sge
AWS
8.6 years ago
n.huckle
▴ 30
2
votes
6
replies
1.5k
views
Enable copying Bioconductor AMI to new region
aws
bioconductor aws
ami
amazon
updated 6.5 years ago by
shepherl
3.8k • written 6.5 years ago by
neal
▴ 10
2
votes
2
replies
1.2k
views
Is shellinabox support a feature of all Bioconductor Amazon Machine Images?
ami
updated 8.3 years ago by
Dan Tenenbaum
★ 8.2k • written 8.3 years ago by
joshmobrien
• 0
1
vote
2
replies
1.3k
views
RStudio in Bioconductor 3.5 AMI incompatible with R 3.4
AMI
rstudio server
updated 6.9 years ago by
shepherl
3.8k • written 6.9 years ago by
Thomas Sandmann
▴ 90
0
votes
1
reply
2.3k
views
Upload error in RStudio running on Amazon - AMI
AMI
RStudio
upload error
custom install
updated 9.3 years ago by
Dan Tenenbaum
★ 8.2k • written 9.3 years ago by
nicholas.provart
• 0
0
votes
3
replies
1.1k
views
Bioconductor Release AMI's
Release
release
AWS
AMI
Bioconductor
updated 2.9 years ago by
Vincent J. Carey, Jr.
6.7k • written 2.9 years ago by
shepherl
3.8k
0
votes
2
replies
1.6k
views
How to launch a preconfigured Bioconductor AMI session using the free tier with RStudio Server?
bioconductor
amazon
ami
cloud
updated 7.8 years ago by
shepherl
3.8k • written 7.8 years ago by
kdkorthauer
• 0
0
votes
7
replies
2.2k
views
Using AMI with StarCluster - error authenticating
AMI
updated 7.2 years ago by
Dan Tenenbaum
★ 8.2k • written 7.2 years ago by
spollack
• 0
0
votes
5
replies
1.6k
views
Using RStudio AMI with localhost
RStudio
AWS
AMI
4.8 years ago
bio-explorer
• 0
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Comment: How to retrieve detailed regression results from deseq2
by
Weiqian
▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size
by
Jonathan
▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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