Bioconductor Annotationtrack

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annotationTrack Gviz

updated 8.1 years ago by florian.hahne@novartis.com ★ 1.6k • written 8.2 years ago by Tiphaine Martin ▴ 40

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Gviz gviz-package GFF annotationtrack strand-dependent

updated 4.8 years ago by Robert Ivanek ▴ 730 • written 4.8 years ago by JezDD • 0

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Comment: Exporting DESeq2 filtered results by James W. MacDonald 63k

I am interested to know what part of my response you found rude. I asked nicely that you don't add to ancient posts, said your post isn't r…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

> I can imagine writing a sparse high-dimensional array in HDF5, but I'm still not sure how to implement the part where it is read and imme…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

Not in BioC 3.18. At some point (e.g. in 6 months) they will be deprecated, then 6 months later (i.e. in 1 year) they will be defunct, then…

Comment: Biostrings error at retrieving protein sequences by Hervé Pagès 16k

Yes, but you need to put the clean names back on the AAStringSet object: ``` names(protein_sequences) <- gsub(" .*", "", names(protein_sequ…

Comment: Exporting DESeq2 filtered results by camillab. ▴ 10

thanks! I didn't`t notice that. I will cancel it now!

Votes

Answer: enrichKEGG

A: Effect of lfcThreshold on p-value in DESeq2

Comment: Mixed up sample info with plotPCA

Answer: Setting up a multi-factor experiement

Answer: Mouse to Human Genes using bioconductor

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Popular Question to Guido Hooiveld ★ 3.7k