Showing : arrayquality • reset
0
votes
1
reply
1.3k
views
arrayQuality: error from maQualityPlots
arrayQuality
updated 9.0 years ago by 50k • written 17.1 years ago by ▴ 60
0
votes
0
replies
993
views
maQualityPlots: cannot coerce type 'S4' to vector of type
arrayQuality arrayQualityMetrics arrayQuality arrayQualityMetrics
10.3 years ago Agnes Paquet ▴ 30
0
votes
0
replies
3.4k
views
maQualityPlots: cannot coerce type 'S4' to vector of type 'double'
arrayQuality arrayQuality
10.3 years ago Saket Choudhary ▴ 130
0
votes
1
reply
1.4k
views
arrayQuality - maQualityPlots - Error: duplicate switch defaults: 'list(dev =...' and ''
arrayQuality arrayQuality
updated 12.6 years ago by 25k • written 12.6 years ago by ▴ 20
0
votes
0
replies
1.4k
views
arrayQuality - maQualityPlots - Error: duplicate switch defaults: 'list(dev =...' and ''
arrayQuality arrayQuality
12.9 years ago Fabio Liberante ▴ 20
0
votes
6
replies
1.2k
views
Error using arrayQuality and Agilent txt files
arrayQuality arrayQuality
13.6 years ago • updated 13.5 years ago F. Javier López ▴ 30
0
votes
0
replies
1.0k
views
ArrayQuality package bug in agQuality function - marray package
Microarray arrayQuality Microarray arrayQuality
15.8 years ago Marcus Davy ▴ 680
0
votes
2
replies
1.1k
views
problem with arrayQuality in OSX 10.5
arrayQuality arrayQuality
updated 16.1 years ago by ▴ 130 • written 16.1 years ago by ▴ 50
0
votes
4
replies
1.2k
views
Agilent CGH data
CGH arrayQuality marray CGH arrayQuality marray
updated 16.6 years ago by 21k • written 16.6 years ago by ▴ 230
0
votes
2
replies
1.8k
views
hexbin package installation probs
hexbin arrayQuality hexbin arrayQuality
updated 16.7 years ago by 65k • written 16.7 years ago by ▴ 230
0
votes
0
replies
1.1k
views
marray and limma error with lmFit
Microarray Biobase DynDoc widgetTools limma arrayQuality marray convert Microarray DynDoc
17.0 years ago Paquet, Agnes ▴ 500
0
votes
0
replies
792
views
I would like to know how to run PRvQCHyb in arrayQuality
arrayQuality arrayQuality
17.2 years ago Wonjong Moon ▴ 80
0
votes
3
replies
1.3k
views
maQualityPlots on Mac
GUI arrayQuality marray GUI arrayQuality marray
updated 17.7 years ago by ▴ 300 • written 17.7 years ago by 16k
0
votes
0
replies
866
views
MEEBO-tool in arrayQuality
GO arrayQuality GO arrayQuality
18.1 years ago Paquet, Agnes ▴ 500
0
votes
3
replies
1.3k
views
bugs in arrayQuality and marray
Normalization Biobase hexbin arrayQuality marray Normalization Biobase hexbin arrayQuality
18.4 years ago Paquet, Agnes ▴ 500
0
votes
0
replies
969
views
RE: maQualityPlots (qpHexbin) question
hexbin arrayQuality hexbin arrayQuality
18.9 years ago Paquet, Agnes ▴ 500
0
votes
0
replies
844
views
maQualityPlots (qpHexbin) question
hexbin arrayQuality hexbin arrayQuality
18.9 years ago Rob J Goedman ▴ 40
0
votes
0
replies
779
views
arrayQuality: Error: recursive default argument reference
arrayQuality arrayQuality
19.0 years ago vijayaraj nagarajan ▴ 80
0
votes
3
replies
1.1k
views
problem using arrayQuality package
Normalization limma arrayQuality Normalization limma arrayQuality
updated 19.2 years ago by ▴ 500 • written 19.2 years ago by ▴ 510
0
votes
1
reply
1.1k
views
Error message when running arrayQuality 1.0.9
arrayQuality marray arrayQuality marray
updated 19.3 years ago by ▴ 500 • written 19.3 years ago by ▴ 10
0
votes
4
replies
1.5k
views
issue in arrayQuality package
hexbin arrayQuality hexbin arrayQuality
19.3 years ago Longsi Ran ▴ 30
0
votes
0
replies
865
views
can't get release hexbin source package
GO hexbin arrayQuality GO hexbin arrayQuality
19.5 years ago Darlene Goldstein ▴ 230
0
votes
1
reply
873
views
Questions on arrayQuality
Cancer arrayQuality Cancer arrayQuality
updated 19.8 years ago by ▴ 500 • written 19.8 years ago by ★ 2.0k
23 results • Page 1 of 1
Recent ...
Replies
Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR) by Michael Love 41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10
With all my love, thank you Guido, GOxploreR beeing a big ally for me. I don't know how to be grateful right now.
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
You didn't generate it with an experiment, you made it up: Your PCA doesn't look like a good RNASeq experiment, because it's not.
Answer: Opposite sign of LFC in count plots of DEGs (DESeq2) by swbarnes2 ★ 1.3k
Your contrast is comparing LGR5 to Homeostasis. The bottom 2 are fine, it's the top one that is wrong. Are you sure this step isn't misla…
Comment: get BM error by James W. MacDonald 65k
I believe you need NCBI Gene IDs for KEGG, in which case you may need to map. The three genes you have shown here don't map, and of those t…
Votes
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
C: when to apply quantile normalization with voom in limma/voom framework with RNA-
A: How to know if I should use voomWithQualityWeights() or not?
A: Weird results (ribosomal proteins / Y-linked genes) in limma/voom
Awards • All
Popular Question to Gordon Smyth 50k
Popular Question to Chris • 0
Supporter to Jonathan ▴ 10
Popular Question to Bine ▴ 40
Scholar to ATpoint ★ 4.0k
Locations • All
WEHI, Melbourne, Australia, 12 minutes ago
France, 18 minutes ago
Melbourne, Australia, 21 minutes ago
United States, 25 minutes ago
Canada, 1 hour ago
Traffic: 749 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6