Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
bayesian
•
reset
0
votes
0
replies
17k
views
1000 R tutorials/Links
Sequencing
Microarray
Genetics
Visualization
Network
Bayesian
Classification
Clustering
13.8 years ago
David Lyon
▴ 340
7
votes
1
reply
12k
views
How does limma t-test work?
Bayesian
limma
Bayesian
limma
updated 11.6 years ago by
James W. MacDonald
65k • written 11.6 years ago by
Jorge Miró
▴ 160
0
votes
6
replies
6.9k
views
DeSeq vs current version of Cuffdiff
Sequencing
Bayesian
Cancer
DESeq
Sequencing
Bayesian
Cancer
DESeq
updated 12.1 years ago by
Stephen Turner
▴ 290 • written 12.1 years ago by
Richard Friedman
★ 2.0k
3
votes
0
replies
2.7k
views
Evidence-based guidelines for use the method="robust" option in lmFit
Microarray
Normalization
Bayesian
Regression
Cancer
limma
Microarray
Normalization
Cancer
12.8 years ago
Richard Friedman
★ 2.0k
0
votes
3
replies
2.5k
views
Inherits(x,"data.frame") error in SamR
Microarray
Normalization
Preprocessing
Bayesian
Clustering
TimeCourse
Cancer
affy
vsn
LPE
18.1 years ago
McGee, Monnie
▴ 300
0
votes
1
reply
2.2k
views
TMM and calcNormFactors: Normalization in baySeq to match edgeR and DESeq
Normalization
Bayesian
edgeR
baySeq
DESeq
Normalization
Bayesian
edgeR
baySeq
DESeq
updated 12.4 years ago by
Smith, Hilary A
▴ 40 • written 12.4 years ago by
Gordon Smyth
50k
0
votes
0
replies
2.2k
views
Rgraphviz plot of bnlearn object with text too big
Network
Bayesian
Rgraphviz
Network
Bayesian
Rgraphviz
12.8 years ago
João Daniel Nunes Duarte
▴ 30
0
votes
0
replies
1.9k
views
Limma weights, P values and differential expression
Normalization
Bayesian
Regression
probe
limma
Normalization
Bayesian
Regression
probe
17.6 years ago
Gordon Smyth
50k
0
votes
0
replies
1.7k
views
Post Doctoral Openings at University of Pittsburgh
Bayesian
HIV
Bayesian
HIV
11.5 years ago
Porterfield, Toni
▴ 10
0
votes
3
replies
1.6k
views
Timeseries loop design analysis using Limma or Maanova?
Bayesian
Clustering
TimeCourse
timecourse
oligo
Bayesian
Clustering
TimeCourse
timecourse
18.1 years ago
Pete
▴ 70
0
votes
10
replies
1.6k
views
objective criterion for identification of outlying arrays by pca
Bayesian
Cancer
Bayesian
Cancer
updated 12.4 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.4 years ago by
Richard Friedman
★ 2.0k
0
votes
0
replies
1.6k
views
Senior Bioinformatics Research Scientist Position at Garvan Institute, Australia
Epigenetics
Bayesian
Cancer
Breast
Epigenetics
Bayesian
Cancer
Breast
16.2 years ago
Jean Yee Hwa Yang
▴ 130
0
votes
3
replies
1.5k
views
Bioconductor 2.3 is released
aCGH
Sequencing
miRNA
Microarray
Visualization
Bayesian
Classification
Survival
Yeast
LPE
15.4 years ago
Patrick Aboyoun
★ 1.6k
3
votes
1
reply
1.4k
views
Limma without eBayes, is it indistunguishable from Ordinary Least Square?
Limma
ebayes
bayesian
ls
updated 5.5 years ago by
Gordon Smyth
50k • written 5.5 years ago by
CantExitVIM
▴ 10
0
votes
3
replies
1.4k
views
Bayesian networks in BioC
Bayesian
Bayesian
updated 17.8 years ago by
Henrik Bengtsson
★ 2.4k • written 17.8 years ago by
Jacob Michaelson
▴ 320
0
votes
0
replies
1.4k
views
NUSE and RLE PLOTS for ST1.0 Gene chips with oligo w/o 1st quantile line
Bayesian
Cancer
oligo
Bayesian
Cancer
oligo
12.4 years ago
Richard Friedman
★ 2.0k
1
vote
3
replies
1.4k
views
Differential expressiong with two groups in BASiCS
BASiCS
single-cell
bayesian
differential expression
updated 6.1 years ago by
CataVallejos
▴ 10 • written 6.1 years ago by
muad.abdelhay
▴ 10
0
votes
0
replies
1.3k
views
CyberT: Paired Bayes t-test (Bayes corrected p-values)
Normalization
Bayesian
Normalization
Bayesian
18.8 years ago
Gordon Smyth
50k
0
votes
0
replies
1.3k
views
Bioconductor 2.7 is released
BiocViews
aCGH
Transcription
RNASeq
miRNA
Microarray
Normalization
Network
Bayesian
aCGH
13.4 years ago
Martin Morgan
25k
0
votes
1
reply
1.3k
views
Job Posting in Biostatistics/Statistics
Bayesian
Survival
Cancer
PROcess
ASSET
Bayesian
Survival
Cancer
PROcess
ASSET
updated 21.3 years ago by
Johannes Hüsing
▴ 80 • written 21.3 years ago by
Janusz Kawczak
▴ 10
0
votes
1
reply
1.3k
views
Bioconductor 2.1 is released
SNP
Microarray
SAGE
Annotation
Bayesian
Regression
GUI
CGH
hgu95av2
graph
Rgraphviz
SNP
16.5 years ago
Hervé Pagès
16k
0
votes
0
replies
1.3k
views
objective criterion for identification of outlying arrays by pca
Network
Bayesian
Cancer
Network
Bayesian
Cancer
12.4 years ago
shirley zhang
★ 1.0k
1
vote
0
replies
1.3k
views
adjusted p values of the genes in the intersection of Venn
Bayesian
limma
Bayesian
limma
17.4 years ago
Gordon Smyth
50k
0
votes
0
replies
1.3k
views
PhD Student Position in Statistics on Bayesian Methods for Integrated Genomics
Microarray
Bayesian
Microarray
Bayesian
17.9 years ago
Ivo Kwee
▴ 30
0
votes
0
replies
1.2k
views
Bayesian additive regression trees (BART) for classification analysis of gene expression data
Bayesian
Regression
Bayesian
Regression
13.1 years ago
Santosh Patnaik
▴ 30
0
votes
4
replies
1.2k
views
How to get started with bioconductor ?
Bayesian
limma
Bayesian
limma
updated 20.6 years ago by
Gordon Smyth
50k • written 20.6 years ago by
Luke Whitaker
▴ 20
0
votes
1
reply
1.2k
views
BioC 2.2 now available
SNP
Microarray
Genetics
Annotation
Preprocessing
Bayesian
Clustering
Infrastructure
Cancer
updated 15.9 years ago by
Patrick Aboyoun
★ 1.6k • written 15.9 years ago by
Martin Morgan
25k
0
votes
0
replies
1.2k
views
Bioconductor 2.5 is released
Sequencing
miRNA
Microarray
qPCR
Annotation
Network
Bayesian
Regression
CGH
stam
Rintact
14.4 years ago
Patrick Aboyoun
★ 1.6k
0
votes
2
replies
1.2k
views
Rgraphviz produces segmentation fault when attempting to plot Bayesian Belief Networks
Bayesian
graph
Bayesian
graph
updated 12.4 years ago by
Sean Davis
21k • written 12.4 years ago by
Royce Francis
▴ 20
0
votes
2
replies
1.2k
views
BASiCS spike info for single cell RNA sequences or Bayesian statistics help
BASiCS
bayesian
single cell
scrnaseq
updated 6.1 years ago by
CataVallejos
▴ 10 • written 6.1 years ago by
alexandriapinto1
▴ 10
0
votes
0
replies
1.2k
views
Bioconductor 2.10 is released
Transcription
Sequencing
Microarray
Annotation
Normalization
Visualization
Network
Bayesian
12.0 years ago
Dan Tenenbaum
★ 8.2k
0
votes
0
replies
1.2k
views
Filtering out tags with low counts in DESeq and EgdeR?
Bayesian
limma
edgeR
DESeq
Bayesian
limma
edgeR
DESeq
12.9 years ago
Xiaohui Wu
▴ 280
0
votes
0
replies
1.2k
views
PhD Student Position in Statistics in Switzerland on Bayesian Methods for Integrated Genomics
Microarray
Bayesian
Microarray
Bayesian
18.0 years ago
Ivo Kwee
▴ 30
0
votes
0
replies
1.1k
views
DSS DMLTest Prior Estimate of theta dispersion
DSS
dmltest
bayesian
statistics
methylation
6.0 years ago
floriandeckert
▴ 30
0
votes
3
replies
1.1k
views
Practical utilization of SQN in ST1.0 Gene normalization.
Bayesian
Cancer
oligo
Bayesian
Cancer
oligo
updated 12.4 years ago by
Tim Triche
★ 4.2k • written 12.4 years ago by
Richard Friedman
★ 2.0k
0
votes
3
replies
1.1k
views
Nonorthogonal multiple comparisons in Limma/ Books on Bayesian Statistics
Bayesian
Classification
limma
bridge
Bayesian
Classification
limma
bridge
19.7 years ago
Gordon Smyth
50k
0
votes
0
replies
1.1k
views
BioC 2.0 is available
SNP
Microarray
Genetics
Annotation
Visualization
Bayesian
Survival
GUI
Cancer
adme16cod
16.9 years ago
Seth Falcon
★ 7.4k
0
votes
0
replies
1.1k
views
Pathway specific gene lists in SPIA
Bayesian
Cancer
Bayesian
Cancer
12.7 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.1k
views
Bioconductor Digest, Vol 83, Issue 23
Bayesian
ROC
graph
limma
Bayesian
ROC
graph
limma
14.2 years ago
M. Carmen Ruiz de Villa
▴ 10
0
votes
2
replies
1.1k
views
analysis with no replication
Bayesian
limma
Bayesian
limma
updated 16.8 years ago by
Richard Pearson
▴ 390 • written 16.8 years ago by
lidaof
▴ 450
0
votes
1
reply
1.1k
views
Fwd: Presentation 19th June
Bayesian
convert
Bayesian
convert
14.8 years ago
Mark Robinson
★ 1.1k
0
votes
0
replies
1.0k
views
Assistant/Associate Professor Department of Biostatistics
Pathways
Bayesian
Cancer
charm
Pathways
Bayesian
Cancer
charm
15.1 years ago
Kellie J. Archer, Ph.D.
▴ 120
0
votes
0
replies
1.0k
views
Conference announcement: Compstat 2004
Visualization
Bayesian
Classification
Clustering
Regression
Visualization
Bayesian
20.2 years ago
Wolfgang Huber
★ 13k
0
votes
2
replies
1.0k
views
Removing genes from linear model fit advice sought
Microarray
Bayesian
Microarray
Bayesian
updated 14.1 years ago by
Yong Li
▴ 190 • written 14.1 years ago by
stephen sefick
▴ 10
0
votes
0
replies
1.0k
views
nem package, nem.BN learning with 'continuous_Baysian' not possible
Network
Bayesian
nem
Network
Bayesian
nem
11.7 years ago
Siebourg Juliane
▴ 10
0
votes
1
reply
1.0k
views
Limma script - Opinions requested
Bayesian
limma
PROcess
Bayesian
limma
PROcess
13.6 years ago
Gordon Smyth
50k
0
votes
0
replies
1.0k
views
Limma script - Opinions requested
Annotation
Bayesian
limma
PROcess
Annotation
Bayesian
limma
PROcess
13.6 years ago
Orfe, Lisa
▴ 20
0
votes
0
replies
1.0k
views
normalization and clustering etc...
Bayesian
Clustering
Leukemia
affy
PROcess
DOSE
Bayesian
Clustering
Leukemia
affy
PROcess
21.0 years ago
Phguardiol@aol.com
▴ 720
0
votes
0
replies
985
views
Conference announcement: Compstat 2004
Visualization
Bayesian
Classification
Clustering
Regression
Visualization
Bayesian
20.5 years ago
Wolfgang Huber
★ 13k
0
votes
2
replies
976
views
RELATED TO CLUSTERING
Bayesian
Bayesian
updated 12.7 years ago by
Sean Davis
21k • written 12.7 years ago by
sanchita 0804
▴ 50
50 results • Page
1 of 1
Recent ...
Replies
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Comment: DEG Filtering
by
Gordon Smyth
50k
I already know that you using CEL files because you need them to perform RMA normalization. Yes, you should follow the advice I have alread…
Votes
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
Circumvent creating .ff files in the working directory when using genotype.Illumina() function
Answer: Problem with maplot {affy} method when using rma {affy} method output as its inp
Awards
• All
Popular Question
to
Pierre Lindenbaum
▴ 10
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Jenny Drnevich
★ 2.0k
Popular Question
to
Robert Castelo
★ 3.1k
Teacher
to
Peter Langfelder
★ 2.9k
Locations
• All
Spain,
1 minute ago
United States,
8 minutes ago
United Kingdom,
8 minutes ago
France,
11 minutes ago
Germany,
12 minutes ago
Traffic: 702 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6