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bioc-devel
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reset
1
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2
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646
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Segmentation Fault with development versions of R, Bioconductor, and DropletUtils when processing output of CellRanger 3.0.2
DropletUtils
Bioc-devel
3.1 years ago
Matthew Thornton
▴ 350
1
vote
5
replies
581
views
[DEVELOPMENT] Trying to use development version of Bioconductor, needs R 3.6?...
developers
bioc-devel
3.5 years ago
Casper Peters
• 0
0
votes
2
replies
651
views
Circular dependencies between data and software packages: how best to avoid
developers
bioc-devel
package development
circular dependencies
updated 3.6 years ago by
shepherl
3.1k • written 3.6 years ago by
Tim Triche
★ 4.2k
3
votes
1
reply
1.4k
views
News:
Latin American BioC Developers Workshop 2018
bioconductor
developers
bioc-devel
News
4.1 years ago
Alejandro Reyes
★ 1.8k
6
votes
3
replies
1.6k
views
How to solve "WARNING: Add non-empty \value" with roxygen tags
bioccheck
roxygen2
warning
bioc-devel
package development
updated 4.6 years ago by
Lluís Revilla Sancho
▴ 660 • written 4.6 years ago by
Paul Brennan
▴ 10
0
votes
0
replies
1.4k
views
Tutorial:
Using Subversion to update /devel branch of Bioconductor package
subversion
bioc-devel
package development
usedevel
Tutorial
4.8 years ago
Bohdan Khomtchouk
▴ 10
3
votes
2
replies
705
views
Changing lead developer for existing package
developers
bioc-devel
updated 5.1 years ago by
Martin Morgan
25k • written 5.1 years ago by
mlbendall
• 0
2
votes
8
replies
2.3k
views
Unable to load/install rtracklayer (v1.33.2) on OS X (possibly SSL-related?)
rtracklayer
bioc-devel
ssl
openssl
updated 6.0 years ago by
Michael Lawrence
11k • written 6.0 years ago by
Peter Hickey
▴ 550
1
vote
3
replies
1.0k
views
Are there any bioconductor github mirrors for data packages?
software
bioc-devel
developers
R
updated 6.5 years ago by
Dan Tenenbaum
★ 8.2k • written 6.5 years ago by
MarcinKosiński
• 0
3
votes
6
replies
1.3k
views
Bioconductor Docker Development container
docker
bioc-devel
updated 7.0 years ago by
Dan Tenenbaum
★ 8.2k • written 7.0 years ago by
Nathan Sheffield
▴ 10
5
votes
3
replies
1.1k
views
BiocCheck: REQUIRED: vignette sources in vignettes/ directory (for custom vignettebuilder)
package
bioconductor
bioc-devel
developers
7.0 years ago
flying-sheep
▴ 10
0
votes
2
replies
1.4k
views
Error reading vcf converted from bed file
readvcf
plink
file conversion
bed
bioc-devel
7.2 years ago
mjsduncan
• 0
0
votes
1
reply
1.6k
views
installation of GenomicRanges package in Rdevel fails
installation
bioc-devel
updated 7.6 years ago by
Martin Morgan
25k • written 7.6 years ago by
Tiphaine Martin
▴ 40
1
vote
1
reply
1.3k
views
Using hash packages with package:rtracklayer, GenomicRanges, Gviz, IRanges, biomaRt conflict
software error
bioc-devel
updated 7.6 years ago by
Martin Morgan
25k • written 7.6 years ago by
Tiphaine Martin
▴ 40
14 results • Page
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Replies
Comment: DEXSeq: samples$sample_id %in% colnames(counts) is not TRUE
by
jeroen.gilis
▴ 30
Hi phoebe1354, Sorry for the late reply, will try to follow it up now (if still relevant). Could you just give me `head(rownames(cts))` an…
Comment: DiffBind always reverts to default normalization
by
bers.anthrope
• 0
Thanks a lot, everything works now!
Comment: Is it necessary to standardize Combat in R?
by
takemoto
• 0
Thank you very much!
Comment: Error in h(simpleError(msg, call)) : when calling makeOrgPackagefromNCBI()
by
Lan Anh
• 0
Hello, Sorry for the late answer, I called several packages after my error and I do not know how it worked after that. Thank you for the h…
Comment: LogFC values in edgeR - w/wo intercept
by
JK Kim
• 0
Thanks, Dr. Smyth!
Votes
Answer: DiffBind always reverts to default normalization
Answer: DiffBind always reverts to default normalization
Answer: BiomaRt connection error: Could not connect to mysql database ensembl_mart_104
Comment: LogFC values in edgeR - w/wo intercept
Answer: LogFC values in edgeR - w/wo intercept
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