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bioc-devel
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1
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2
replies
1.2k
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Segmentation Fault with development versions of R, Bioconductor, and DropletUtils when processing output of CellRanger 3.0.2
DropletUtils
Bioc-devel
5.0 years ago
Matthew Thornton
▴ 350
1
vote
5
replies
1.1k
views
[DEVELOPMENT] Trying to use development version of Bioconductor, needs R 3.6?...
developers
bioc-devel
5.4 years ago
Casper van Mourik
• 0
0
votes
2
replies
1.3k
views
Circular dependencies between data and software packages: how best to avoid
developers
bioc-devel
package development
circular dependencies
updated 5.5 years ago by
shepherl
3.8k • written 5.5 years ago by
Tim Triche
★ 4.2k
3
votes
1
reply
2.1k
views
News:
Latin American BioC Developers Workshop 2018
bioconductor
developers
bioc-devel
News
6.0 years ago
Alejandro Reyes
★ 1.9k
6
votes
3
replies
2.6k
views
How to solve "WARNING: Add non-empty \value" with roxygen tags
bioccheck
roxygen2
warning
bioc-devel
package development
updated 6.5 years ago by
Lluís Revilla Sancho
▴ 730 • written 6.5 years ago by
Paul Brennan
▴ 10
0
votes
0
replies
2.2k
views
Tutorial:
Using Subversion to update /devel branch of Bioconductor package
subversion
bioc-devel
package development
usedevel
Tutorial
6.7 years ago
Bohdan Khomtchouk
▴ 10
3
votes
2
replies
1.1k
views
Changing lead developer for existing package
developers
bioc-devel
updated 7.0 years ago by
Martin Morgan
25k • written 7.0 years ago by
mlbendall
• 0
2
votes
8
replies
3.5k
views
Unable to load/install rtracklayer (v1.33.2) on OS X (possibly SSL-related?)
rtracklayer
bioc-devel
ssl
openssl
updated 7.9 years ago by
Michael Lawrence
★ 11k • written 7.9 years ago by
Peter Hickey
▴ 710
1
vote
3
replies
1.6k
views
Are there any bioconductor github mirrors for data packages?
software
bioc-devel
developers
R
updated 8.4 years ago by
Dan Tenenbaum
★ 8.2k • written 8.4 years ago by
MarcinKosiński
• 0
3
votes
6
replies
2.1k
views
Bioconductor Docker Development container
docker
bioc-devel
updated 8.9 years ago by
Dan Tenenbaum
★ 8.2k • written 8.9 years ago by
Nathan Sheffield
▴ 10
5
votes
3
replies
1.6k
views
BiocCheck: REQUIRED: vignette sources in vignettes/ directory (for custom vignettebuilder)
package
bioconductor
bioc-devel
developers
8.9 years ago
flying-sheep
▴ 10
0
votes
2
replies
2.1k
views
Error reading vcf converted from bed file
readvcf
plink
file conversion
bed
bioc-devel
9.1 years ago
mjsduncan
• 0
0
votes
1
reply
2.0k
views
installation of GenomicRanges package in Rdevel fails
installation
bioc-devel
updated 9.5 years ago by
Martin Morgan
25k • written 9.5 years ago by
Tiphaine Martin
▴ 40
1
vote
1
reply
1.7k
views
Using hash packages with package:rtracklayer, GenomicRanges, Gviz, IRanges, biomaRt conflict
software error
bioc-devel
updated 9.5 years ago by
Martin Morgan
25k • written 9.5 years ago by
Tiphaine Martin
▴ 40
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Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with doctor know about Alzheimer and they don't expect significan…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Comment: Methylation Analysis experiment design using Limma
by
hortense96
• 0
Hi, Thank you very much for your answer. It's true that I only used 6 samples for this analysis, which is consistent with your explanation…
Comment: Error using champ.import
by
shilpa
• 0
I'm having same issues too. Did anyone manage to resolve it?
Answer: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
You don't explain how many samples you have (columns of data), but the warning message shown in your post would arise if there are in fact …
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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