Bioconductor Bioc2019

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BioC2019 News

updated 5.1 years ago by Julie Zhu ★ 4.3k • written 5.2 years ago by Levi Waldron ★ 1.1k

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bioc2019 News

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bioc2019 News

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conference bioc2019 News

4.9 years ago Levi Waldron ★ 1.1k

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Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0

Hi Gordon, thank you so much for your guide! I check my data as you said there is no difference in my data. This is the MDS plot at genes l…

Comment: How to correct for known and surrogate variables in DESeq2? by Michael Love 41k

To question 3: if you model technical variation using only ~group vs ~1, then it will be correlated with known technical variables, which y…

Answer: flowStats Search Error by shepherl 3.8k

We are aware of an issue with bioconductor.org search and are investigating. We apologize for an inconvenience this is causing.

Comment: How to correct for known and surrogate variables in DESeq2? by nhaus ▴ 30

Hey Crystal, did you end up getting advice? I am facing the exact same questions that you are having right now. Would be very grateful if y…

Answer: List of Deprecated Packages for Bioc3.18 by shepherl 3.8k

previously unannounced, COHCAP is not deprecated but removed with release 3.19. see [mailing list discussion](https://stat.ethz.ch/piperm…

Votes

C: Add new columns to DESeqResults from text file by matching rownames.

Answer: geneList error in clusterprofiler

Comment: Memory errors using read.bismark?

Comment: Not fully paired differential gene expression analysis

Comment: [DiffBind] Obtaining normalization factors

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