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bioc2020
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News:
Bioc2020 - Call for BOF/HAK/FAQ Sections Still Open
conference
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3.8 years ago
shepherl
3.8k
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News:
Award Nomination Deadline Monday June 15th!
bioc2020
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bioconductor
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3.9 years ago
shepherl
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News:
Scientific or Informatic Technology Advancement Award!
bioconductor
bioc2020
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3.9 years ago
shepherl
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Long-term contribution award
bioc2020
bioconductor
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3.9 years ago
shepherl
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1000
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Community engagement and outreach award
bioconductor
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written 3.9 years ago by
shepherl
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Documentation Bioconductor Award
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3.9 years ago
shepherl
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New Package Bioconductor Award
bioconductor
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3.9 years ago
shepherl
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Support Site Bioconductor Award
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shepherl
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Bioc2020 - Virtual Conference Registration
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3.9 years ago
shepherl
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News:
Nominations for Bioconductor Awards!
Bioc2020
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4.0 years ago • updated 3.9 years ago
shepherl
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Bioc2020 - Call for BOF/HAK/FAQ Sections
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4.1 years ago • updated 3.8 years ago
shepherl
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News:
Bioc2020 - Deadline for workshops/talk/poster proposals TODAY!
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4.1 years ago
shepherl
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Bioc2020 - Deadline for workshops/talk/poster TOMORROW
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4.1 years ago
shepherl
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Bioc2020 - Deadline for workshops/talk/poster proposals in ONE week
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4.2 years ago
shepherl
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shepherl
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4.2 years ago
shepherl
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Organizing Committee for BioC2020
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4.6 years ago
shepherl
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17 results • Page
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Recent ...
Replies
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
Alexandre
• 0
My code for the sessionInfo() . If the pictures are too big, I will downsize them. THank you again for reading my post ! ```r > sessionInf…
Comment: Reproducibility issue with scran together with lapply and BiocParallel
by
ATpoint
★ 4.0k
Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…
Answer: Reproducibility issue with scran together with lapply and BiocParallel
by
Aaron Lun
★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Votes
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
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