Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
bioccheck
•
reset
7
votes
2
replies
1.1k
views
Format roxgen comment (alternative to formatR)
BiocCheck
written 2.6 years ago by
ZheFrench
▴ 40
5
votes
2
replies
928
views
Coding Style for BioC Package submissions: camelCaps or snake_case?
BiocCheck
style
updated 2.4 years ago by
Steve Lianoglou
★ 13k • written 2.4 years ago by
pouryany
• 0
0
votes
2
replies
914
views
BiocCheck object initialization - NOTE
BiocC
BiocCheck
2.9 years ago
ullrich
▴ 20
0
votes
2
replies
701
views
Error running ExperimentHubData::makeExperimentHubMetadata on Windows 10
BiocCheck
updated 3.0 years ago by
shepherl
3.8k • written 3.0 years ago by
wewolski
▴ 10
0
votes
2
replies
1.5k
views
Installation fails only in Linux... How to debug "ERROR: lazy loading failed for package XXX"?
BiocCheck
Install
martini
3.4 years ago
Hector
• 0
0
votes
1
reply
842
views
BiocCheck gives 'Error in readLines(file, skipNul = TRUE) : cannot open the connection'
BiocCheck
updated 4.7 years ago by
James W. MacDonald
65k • written 4.7 years ago by
zhezhenwang
• 0
1
vote
2
replies
1.8k
views
Dealing With Package Sizes Greater than 5 MB
data
package submission
BiocCheck
4.7 years ago
j.flesch
▴ 10
0
votes
12
replies
1.1k
views
no vignettes directory error during BiocCheck checking [SOLVED]
BiocCheck
4.9 years ago
waterincan
• 0
0
votes
2
replies
898
views
BiocCheck package size
BiocCheck
updated 5.0 years ago by
Hervé Pagès
16k • written 5.0 years ago by
zhang.jianhai
▴ 10
4
votes
6
replies
4.2k
views
WARNING: remove set.seed usage in R code
R
bioccheck
updated 5.8 years ago by
shepherl
3.8k • written 5.8 years ago by
xyluo1991
• 0
2
votes
5
replies
1.9k
views
How do you run BiocCheck from a continuous integration service?
continuous-integration
testing
bioccheck
updated 5.8 years ago by
Marcel Ramos
690 • written 7.9 years ago by
richierocks
▴ 40
0
votes
1
reply
1.3k
views
Advice on finding: "1 lines (0%) are > 80 characters long" - my last BiocCheck NOTE
bioccheck
package development
6.5 years ago
Paul Brennan
▴ 10
6
votes
3
replies
2.6k
views
How to solve "WARNING: Add non-empty \value" with roxygen tags
bioccheck
roxygen2
warning
bioc-devel
package development
updated 6.5 years ago by
Lluís Revilla Sancho
▴ 730 • written 6.5 years ago by
Paul Brennan
▴ 10
1
vote
2
replies
1.2k
views
BiocCheck path escape issue
bioccheck
bug
7.0 years ago
Michael Steinbaugh
▴ 90
0
votes
2
replies
872
views
NOT SUPPORTED... in BioC check report
bioccheck
build/check error
updated 7.0 years ago by
Martin Morgan
25k • written 7.0 years ago by
ihnatova
• 0
2
votes
10
replies
2.3k
views
BiocCheck incorrectly reports I'm not registered on this site
bioccheck
updated 19 months ago by
Marek Gierlinski
▴ 30 • written 7.5 years ago by
david.a.quigley
• 0
0
votes
1
reply
1.3k
views
built vignette using knitr
knitr
vignettes
built
bioccheck
no-ASCII
8.0 years ago
kmezhoud
▴ 10
1
vote
3
replies
1.8k
views
Man pages with runnable examples calculation
BiocCheck
updated 8.2 years ago by
Dan Tenenbaum
★ 8.2k • written 8.2 years ago by
liz.ingsimmons
▴ 140
18 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
by
shuwangxinze1996
• 0
Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough?
Comment: DESeq2 output used for PCA plot on R studio
by
Kevin Blighe
★ 3.9k
This comment helps.
Comment: DESeq2 output used for PCA plot on R studio
by
Kevin Blighe
★ 3.9k
I am not sure how your comment helps here?
Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR)
by
Michael Love
41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Votes
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
Awards
• All
Supporter
to
JKim
• 0
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Chris
• 0
Supporter
to
Jonathan
▴ 10
Popular Question
to
Bine
▴ 40
Locations
• All
China,
just now
France,
8 minutes ago
San Diego,
10 minutes ago
India,
17 minutes ago
WEHI, Melbourne, Australia,
34 minutes ago
Traffic: 683 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6