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biocfilecache
•
reset
6
votes
12
replies
4.7k
views
BiocFileCache/ExperimentHub/AnnotationHub temporary ERROR
BiocFileCache
AnnotationHub
ExperimentHub
6 months ago • updated 1 day ago
shepherl
3.8k
3
votes
6
replies
1.2k
views
Caching bam index files using BiocFileCache
BiocFileCache
23 months ago • updated 18 months ago
kent.riemondy
▴ 20
1
vote
8
replies
2.4k
views
biomaRt : No lock file for BiocFileCache
BiocFileCache
biomaRt
updated 2.0 years ago by
Martin Morgan
25k • written 2.0 years ago by
ZheFrench
▴ 40
0
votes
3
replies
691
views
How to keep remote file name by bfcadd in BiocFileCache?
BiocFileCache
updated 4.1 years ago by
shepherl
3.8k • written 4.1 years ago by
Qiang
▴ 80
0
votes
2
replies
1.3k
views
Failure to save txDb using saveDb in BiocFileCache location other than /tmp
tximeta
BiocFileCache
updated 3.0 years ago by
Michael Love
41k • written 3.0 years ago by
judith.risse
• 0
0
votes
1
reply
1.1k
views
News:
Updates to BiocFileCache, AnnotationHub, and ExperimentHub
BiocFileCache
AnnotationHub
ExperimentHub
cache
3.1 years ago • updated 3.0 years ago
shepherl
3.8k
0
votes
1
reply
635
views
Importing more than 100,000 at once into BiocFileCache
BiocFileCache
updated 2.6 years ago by
Mike Smith
★ 6.5k • written 2.6 years ago by
pierrick.roger
• 0
7 results • Page
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Comment: How to tell and visualize up/down regulation of pathways from clusterprofiler gs
by
Guangchuang Yu
★ 1.2k
an example is also presented in <https://pubmed.ncbi.nlm.nih.gov/34557778/>.
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
Nothing would prevent you from using the `enrichGO` function (or any other function for over-representation analysis [ORA]) with only 14 ge…
Comment: Different Shrunk Log2FC according with reference
by
andrebolerbarros
▴ 20
Thanks @atpoint for your answer! The issue with that is then it severely hinders the possiblity of using `apeglm` shrinking approach, sinc…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
by
ATpoint
★ 4.0k
The error that is relevant is `Aborted (core dumped)`. This line 2890 refers to the C source code that throws the error, it is not relevant…
Answer: Different Shrunk Log2FC according with reference
by
ATpoint
★ 4.0k
Please see: https://support.bioconductor.org/p/p134551/ I asked basically the same before. In short, reference level might have an influ…
Votes
C: SGSeq: moving toward diffex from SGSeq analysis
DEXSeq-Error in FUN(X[[i]], ...) : subscript out of bounds
Subset DEXSeqDataSet In DEXSeq
How to get all possible comparisons in DiffBind
Comment: get BM error
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ATpoint
★ 4.0k
Popular Question
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Gordon Smyth
50k
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i.sudbery
▴ 40
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Michael Love
41k
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shepherl
3.8k
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