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bioclIte
•
reset
5
votes
11
replies
2.7k
views
Error while installing Phyloseq using biocLite
bioclite
phyloseq
install error
5.5 years ago
khp
▴ 30
2
votes
10
replies
6.0k
views
Install older specific version from an R package that is on the Bioconductor Repository
Bioconductor
biocLite
R packages
oldversion
8.4 years ago
svlachavas
▴ 830
0
votes
9
replies
3.4k
views
Upgrade bioconductor 3.2 to 3.3
bioclIte
tximportData
updated 6.2 years ago by
hauken_heyken
▴ 80 • written 7.8 years ago by
jarod_v6@libero.it
▴ 40
6
votes
8
replies
7.7k
views
Problem installing BiocGenerics
software error
BioGenerics
bioclite
6.4 years ago
p.janitza
▴ 50
2
votes
6
replies
1.4k
views
DESeq2 "summarizeOverlaps" "se" not working, freezing, or too slow
bioclite
bioconductor
summarizeoverlaps
genomicfeatures
genomicalignments
updated 7.3 years ago by
Michael Love
41k • written 7.3 years ago by
BioinfStudent
• 0
0
votes
6
replies
2.5k
views
Problems installing BiocLite on Fedora 23, R 3.2.2
bioclite
gcc
install
fedora
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
Knut Hansen
▴ 20
9
votes
6
replies
9.3k
views
What's the deal with biocLite's "Update all/some/none? [a/s/n]"?
bioclite
7.7 years ago
kjo
▴ 70
2
votes
6
replies
35k
views
Installing Bioclite.R Package
Bioclite
install
8.3 years ago
louiseapps2
• 0
2
votes
5
replies
1.5k
views
Upgrade to 3.6 - can't seem to get past Bioconductor 3.5
bioconductor
bioclite
updated 6.4 years ago by
shepherl
3.8k • written 6.4 years ago by
barb.bryant
▴ 10
0
votes
5
replies
4.1k
views
FactoMineR failed after installing Bioconductor
software error
factomineR
bioclite
updated 8.9 years ago by
Martin Morgan
25k • written 8.9 years ago by
dany_wm44
• 0
3
votes
5
replies
1.7k
views
GO.db installation fails (MacOS, AnnotationDbi, R3.5.0)
GO
bioclite
R3.5
mac os x
annotationdbi
updated 5.8 years ago by
Martin Morgan
25k • written 5.8 years ago by
Jens Preussner
▴ 30
0
votes
5
replies
1.9k
views
openCyto fails to load
opencyto
bioclite
updated 8.4 years ago by
yang.chen
• 0 • written 8.4 years ago by
pavitrarc
▴ 20
0
votes
5
replies
2.5k
views
reactome.db installation problem
reactome.db
bioclite
6.9 years ago
Jan-Jaap
• 0
5
votes
5
replies
2.1k
views
Is BiocInstaller::biocLite incompatible with withr::with_makevars?
biocLite
package installation
withr
biocinstaller
rhtslib
updated 5.6 years ago by
Martin Morgan
25k • written 5.6 years ago by
merv
▴ 120
1
vote
4
replies
1.8k
views
Problem installing Bioconductor
biocLite
updated 5.6 years ago by
Martin Morgan
25k • written 5.6 years ago by
rj.innet
• 0
0
votes
4
replies
4.6k
views
Problems with RSQLite compilation
rsqlite
bioconductor
bioclite
rcpp.h
updated 7.2 years ago by
Martin Morgan
25k • written 7.2 years ago by
conkline
• 0
1
vote
4
replies
1.1k
views
devel version: rtracklayer depends on GenomicRanges 1.19.3 but that's not available
rtracklayer
genomicranges
bioclite
updated 9.4 years ago by
Marc Carlson
★ 7.2k • written 9.4 years ago by
Janet Young
▴ 740
0
votes
4
replies
2.6k
views
Windows 10 openCyto Install: installation path not writeable, unable to update packages: boot, Matrix, mgcv
bioclite
openCyto
package installation
updated 6.1 years ago by
Jiang, Mike
★ 1.3k • written 6.5 years ago by
Robert Baer
▴ 70
0
votes
4
replies
1.3k
views
How could I upgrade 191 old packages in my directory?
bioclite
updated 6.3 years ago by
Martin Morgan
25k • written 6.3 years ago by
zhaolin20042008
• 0
4
votes
4
replies
7.5k
views
Problems install R XML package on CentOS 7
r packages
centos7
bioclite
libxml2
updated 6.6 years ago by
Pariksheet Nanda
▴ 120 • written 6.6 years ago by
kai.karius
▴ 10
0
votes
4
replies
2.0k
views
update packages when installing a new package
bioclite
package updates
updated 8.8 years ago by
Dan Tenenbaum
★ 8.2k • written 8.8 years ago by
carol white
▴ 680
0
votes
4
replies
1.5k
views
biocLITE annotation Rstudio
annotation
bioclite
updated 6.7 years ago by
James W. MacDonald
65k • written 6.7 years ago by
jemaatita
• 0
0
votes
4
replies
6.0k
views
Error in biocLite("BiocUpgrade") when trying to update to latest release
biocinstaller
bioclite
updated 8.5 years ago by
Dan Tenenbaum
★ 8.2k • written 8.5 years ago by
Stephanie M. Gogarten
▴ 870
0
votes
4
replies
3.1k
views
Impossible to use goseq package - problem with geneLenDataBase
goseq
geneLenDataBase
bioclite
rstudio
updated 8.4 years ago by
Martin Morgan
25k • written 8.4 years ago by
amyfm
▴ 10
0
votes
4
replies
2.0k
views
Bioconductor - not updating
bioconductor
R
bioclite
updated 7.0 years ago by
Martin Morgan
25k • written 7.0 years ago by
gdembins
• 0
5
votes
4
replies
5.5k
views
Problem using BiocUpgrade
update
bioclite
updated 9.4 years ago by
Dan Tenenbaum
★ 8.2k • written 9.4 years ago by
dianmante
• 0
8
votes
4
replies
6.9k
views
Can't upgrade to Bioconductor 3.3?
bioconductor
biocupgrade
upgrade
update
bioclite
7.9 years ago
enricoferrero
▴ 660
0
votes
3
replies
1.6k
views
unable to install GenomeWideSNP_6 cdf
makecdfenv
bioclite
updated 6.8 years ago by
James W. MacDonald
65k • written 6.8 years ago by
vinaysbharadhwaj
• 0
1
vote
3
replies
1.5k
views
Error biocLite() newest version of ChAMP
R
bioclite
champ
6.0 years ago
rosa_hegi
▴ 10
1
vote
3
replies
1.9k
views
update all/some/none how to set default to "update all"
biocLite
update
all
default
ask
updated 5.1 years ago by
Fischer-philipp
▴ 30 • written 5.1 years ago by
rgiannico
▴ 10
6
votes
3
replies
11k
views
Why package "BiocLite" is not available (for R version 3.6.1)
biocLite
updated 4.4 years ago by
shepherl
3.8k • written 4.4 years ago by
3076782769
• 0
0
votes
3
replies
1.5k
views
biocLite on R 3.2.0 stalls then vanishes
software error
bioclite
updated 8.9 years ago by
Dan Tenenbaum
★ 8.2k • written 8.9 years ago by
Will Landau
• 0
1
vote
3
replies
1.4k
views
graphite functions missing, installed version is out of date
graphite
bioclite
8.8 years ago
mhlinder
• 0
0
votes
3
replies
1.3k
views
Prevent biocLite() from asking to update packages every time it's used
bioclite
package installation
package updates
updated 7.9 years ago by
Martin Morgan
25k • written 7.9 years ago by
jacorvar
▴ 40
6
votes
2
replies
1.8k
views
BiocUpgrade without being promped to confirm
bioclite
biocinstaller
biocupgrade
updated 9.4 years ago by
Dan Tenenbaum
★ 8.2k • written 9.4 years ago by
Simon Coetzee
▴ 50
0
votes
2
replies
1.2k
views
BiocInstaller_1.16.5.zip not found when using biocLite("BiocUpgrade")
bioclite
biocupgrade
updated 7.9 years ago by
Martin Morgan
25k • written 7.9 years ago by
dan.gatti
• 0
2
votes
2
replies
8.1k
views
biocLite() fails to update packages when main library not writable
bioclite
package updates
updated 9.0 years ago by
Dan Tenenbaum
★ 8.2k • written 9.0 years ago by
Jenny Drnevich
★ 2.0k
1
vote
2
replies
1.5k
views
error in sourcing biocLite: Error in get(".BioC_version_associated_with_R_version", envir = asNamespace("tools")
bioclite
9.0 years ago
melanie.shook
• 0
1
vote
2
replies
903
views
bioclite behaviour with defunct packages
bioclite
8.3 years ago
David.Duffy
▴ 10
1
vote
2
replies
1.8k
views
Trouble Installing Bioconductor Basic Packages
R
bioclite
installation problem
linuxmint
virtualbox
updated 5.6 years ago by
James W. MacDonald
65k • written 5.6 years ago by
tasnif.rahman
• 0
1
vote
2
replies
3.5k
views
dyld: Library not loaded: @rpath/libc++abi.1.dylib
DESeq2
biocLite
updated 5.9 years ago by
Mike Smith
★ 6.5k • written 5.9 years ago by
jordan.berg
• 0
0
votes
2
replies
6.1k
views
Unable to install any bioconductor packages
R
biocinstaller
bioclite
package installation
6.6 years ago
sebastien200109
• 0
0
votes
2
replies
937
views
Predefine default siteRepos for biocLite
biocinstaller
bioclite
6.3 years ago
Martin Marcher
• 0
3
votes
2
replies
15k
views
biocLite R Version
biocLite
updated 3.5 years ago by
Marcel Ramos
690 • written 3.5 years ago by
jmagomez
• 0
1
vote
2
replies
1.5k
views
how to load edgeR each time I start R?
edger
bioclite
installation
updated 8.7 years ago by
James W. MacDonald
65k • written 8.7 years ago by
lplough
• 0
2
votes
2
replies
4.5k
views
Help with installing biocLite.R
biocLite
biocinstaller
8.9 years ago
thomas.mohr
▴ 20
1
vote
2
replies
3.4k
views
BiocLite installation issues
BiocLite
updated 3.6 years ago by
Kevin Blighe
★ 3.9k • written 3.6 years ago by
patricia_slattery
▴ 10
2
votes
2
replies
1.0k
views
biocLite doesn't work
bioconductor
bioclite
updated 5.5 years ago by
shepherl
3.8k • written 5.5 years ago by
zkamali1373
• 0
0
votes
2
replies
1.7k
views
How to permanently add custom repositories to BiocLite
bioclite
repository
repos
6.5 years ago
arnau.bria
• 0
0
votes
2
replies
1.4k
views
Unable to install Bioconductor packages following R upgrade to 3.5.1
bioclite
bioconductor
updated 5.7 years ago by
Martin Morgan
25k • written 5.7 years ago by
AR3513
• 0
50 results • Page
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Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
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This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
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It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
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