Showing : biocviews • reset
0
votes
4
replies
1.8k
views
Passing multiple files to pdInfobuilder
BiocViews biocViews pdInfoBuilder BiocViews BiocViews biocViews pdInfoBuilder
updated 12.2 years ago by ▴ 50 • written 12.2 years ago by ★ 13k
0
votes
5
replies
2.2k
views
Complete variant toolbox: gmapR/VariantTools/VariantAnnotation
BiocViews VariantAnnotation Annotation biocViews Rsubread VariantAnnotation gmapR BiocViews
11.1 years ago Thomas Girke ★ 1.7k
2
votes
4
replies
3.0k
views
makePdInfoPackage for Primeview arrays
BiocViews Annotation Cancer Organism cdf probe affy biocViews BiocViews BiocViews Cancer
updated 11.6 years ago by ★ 3.9k • written 11.6 years ago by ▴ 140
0
votes
3
replies
1.6k
views
pd.mapping 10Karray
BiocViews cdf affyio biocViews oligo pdInfoBuilder BufferedMatrix BiocViews BiocViews cdf
updated 17.4 years ago by ★ 7.4k • written 17.5 years ago by ▴ 10
0
votes
4
replies
4.7k
views
An error in oligo: All the CEL files must be of the same type??
BiocViews Annotation Organism biocViews oligo BiocViews BiocViews Annotation Organism
updated 13.6 years ago by ★ 4.3k • written 13.6 years ago by ▴ 20
0
votes
2
replies
4.1k
views
Bioconductor 2.12 is released
BiocViews aCGH SNP Transcription Sequencing Microarray Coverage Alignment Annotation GO
updated 9.5 years ago by • 0 • written 11.8 years ago by ★ 8.2k
0
votes
2
replies
2.0k
views
pdInfoBuilder fails on Affy's GeneChip Human Transcriptome Array 2.0
BiocViews Annotation Organism biocViews oligo oligoClasses BiocViews BiocViews Annotation
updated 9.7 years ago by ▴ 20 • written 11.0 years ago by ▴ 40
0
votes
2
replies
1.3k
views
Error in DESeq2 Unmix() function: L-BFGS-B needs finite values of 'fn'
deseq2 biocViews
6.6 years ago • updated 9 weeks ago JennyS • 0
0
votes
1
reply
1.0k
views
getting a list of packages by biocView tags
BiocViews biocViews BiocViews BiocViews biocViews
updated 18.7 years ago by ★ 7.4k • written 18.7 years ago by ▴ 50
0
votes
1
reply
1.9k
views
confusion about nomenclature of illumina annotation packages
BiocViews annotate biocViews BiocViews BiocViews annotate biocViews
updated 16.5 years ago by ▴ 280 • written 16.5 years ago by ▴ 130
0
votes
3
replies
1.5k
views
inquiry for CDF file
BiocViews biocViews pdInfoBuilder BiocViews BiocViews biocViews pdInfoBuilder
16.3 years ago Rob Dunne ▴ 230
0
votes
1
reply
1.1k
views
error while using oligo to build a custom affy cdf
BiocViews cdf affy biocViews BiocViews BiocViews cdf affy biocViews
updated 16.3 years ago by 67k • written 16.3 years ago by ▴ 830
0
votes
1
reply
1.8k
views
Affy Gene ST arrays with "oligo"
BiocViews Annotation Organism affy PROcess biocViews BiocViews BiocViews Annotation affy
updated 15.6 years ago by ★ 3.9k • written 15.6 years ago by ▴ 830
0
votes
1
reply
1.6k
views
error fix.by(by.x, x) in Pdinfobuilder package
BiocViews Microarray Annotation Organism biocViews BiocViews BiocViews Microarray Organism
updated 14.3 years ago by ★ 4.3k • written 14.3 years ago by ▴ 60
0
votes
1
reply
1.5k
views
makePdInfoPackage Error in sqliteExecStatement(con, statement, bind.data) : , bind.data must have non-zero dimensions
BiocViews Annotation Organism biocViews BiocViews BiocViews Annotation Organism biocViews
updated 12.9 years ago by ★ 4.3k • written 12.9 years ago by ▴ 20
0
votes
2
replies
1.5k
views
oligo package: extracting position, sequence, and intensity from Affymetrix tiling array
BiocViews Organism biocViews oligo pdInfoBuilder BiocViews BiocViews Organism biocViews
updated 12.8 years ago by ★ 4.3k • written 12.8 years ago by ★ 13k
0
votes
1
reply
1.5k
views
AnnotationDbi: NewSchema vignette error
BiocViews miRNA Annotation Cancer Organism biocViews AnnotationDbi BiocViews BiocViews
updated 12.6 years ago by ★ 7.2k • written 12.6 years ago by ▴ 910
0
votes
1
reply
2.3k
views
Affymetrix HTA 2 array analysis
BiocViews Annotation Cancer Breast Organism PROcess biocViews pdInfoBuilder BiocViews
updated 11.2 years ago by ★ 4.3k • written 11.2 years ago by ▴ 290
1
vote
3
replies
2.7k
views
Probeset/Transcript cluster definitions for HTA2.0 using pdInfoBuilder
BiocViews Annotation Organism biocViews pdInfoBuilder BiocViews BiocViews Annotation
updated 10.4 years ago by 67k • written 10.4 years ago by ▴ 40
0
votes
1
reply
1.3k
views
Question about sumbition process and biocviews
biocviews biocparallel github package submission
updated 8.2 years ago by 25k • written 8.2 years ago by ▴ 30
0
votes
0
replies
1.5k
views
Nimblegen promoter medip array platform design file problem
BiocViews Annotation Organism biocViews pdInfoBuilder charm BiocViews BiocViews Annotation
12.8 years ago zeynep özkeserli ▴ 160
0
votes
0
replies
1.4k
views
Nimblegen promoter medip array platform design file problem
BiocViews Annotation Organism biocViews pdInfoBuilder charm BiocViews BiocViews Annotation
12.8 years ago zeynep özkeserli ▴ 160
1
vote
1
reply
1.2k
views
How to suggest BiocViews tags for an existing package?
biocviews champ
9.4 years ago Peter Hickey ▴ 750
0
votes
0
replies
3.3k
views
Bioconductor 2.11 is released
BiocViews SNP Transcription Sequencing miRNA Microbiome Microarray qPCR Genetics Coverage
12.3 years ago Dan Tenenbaum ★ 8.2k
0
votes
0
replies
1.1k
views
Building AnnotationDbi Packages - Problems when using makeAnnDbPkg
BiocViews Genetics Annotation GO Organism biocViews AnnotationDbi BiocViews BiocViews GO
14.7 years ago Julian Lee ▴ 10
0
votes
0
replies
1.4k
views
Sc03b_MR_v04 CDF package
BiocViews Genetics Yeast cdf probe affy affxparser biocViews oligo pdInfoBuilder Yeast
16.4 years ago Ludo Muller ▴ 50
0
votes
0
replies
4.3k
views
Bioconductor 2.14 is released
BiocViews aCGH SNP Sequencing RNASeq ChIPSeq miRNA Microarray qPCR Metabolomics Coverage
10.8 years ago Dan Tenenbaum ★ 8.2k
0
votes
0
replies
4.3k
views
Bioconductor 2.13 is released
BiocViews aCGH SNP Transcription Sequencing miRNA Microarray Genetics Proteomics Coverage
11.3 years ago Dan Tenenbaum ★ 8.2k
0
votes
0
replies
1.4k
views
BioC 1.9 is released!
BiocViews SNP Microarray Annotation Normalization Visualization Network Infrastructure SNP
18.3 years ago Seth Falcon ★ 7.4k
0
votes
0
replies
1.5k
views
Bioconductor 1.8 for R 2.3.0 is released!
BiocViews aCGH SNP Microarray Annotation GO Clustering Cancer Yeast cdf probe RMAGEML
18.8 years ago Seth Falcon ★ 7.4k
0
votes
0
replies
3.6k
views
Affymetrix HTA 2 array analysis
BiocViews Annotation Cancer Breast Organism PROcess biocViews pdInfoBuilder BiocViews
11.0 years ago Elena Serrano ▴ 30
0
votes
0
replies
1.4k
views
Building AnnotationDbi Packages - Problems when using makeAnnDbPkg
BiocViews Genetics Annotation GO Organism probe biocViews AnnotationDbi BiocViews GO
14.7 years ago Marc Carlson ★ 7.2k
0
votes
0
replies
1.3k
views
confusion about nomenclature of illumina annotationpackages
BiocViews Annotation Cancer Mus musculus illuminaHumanv1 illuminaHumanv2 probe annotate
16.5 years ago Lynn Amon ▴ 280
0
votes
0
replies
1.5k
views
Bioconductor 2.7 is released
BiocViews aCGH Transcription RNASeq miRNA Microarray Normalization Network Bayesian aCGH
14.3 years ago Martin Morgan 25k
0
votes
0
replies
1.6k
views
Using pdInfoBuilder for Human Exon Array
BiocViews Annotation Organism cdf biocViews oligo pdInfoBuilder BiocViews BiocViews cdf
13.6 years ago Maria Rodrigo-Domingo / Region Nordjyll… ▴ 10
0
votes
0
replies
2.3k
views
Affymetrix HTA 2 array analysis
BiocViews Annotation Cancer Breast Organism PROcess biocViews pdInfoBuilder BiocViews
10.8 years ago Elena Serrano ▴ 30
0
votes
0
replies
1.1k
views
makeOrgPackageFromNCBI another error - reversed commands
BiocViews GO Organism ChipName biocViews BiocViews BiocViews GO Organism ChipName
12.9 years ago Guest User ★ 13k
0
votes
3
replies
1.4k
views
qvalues installation
biocViews
3.9 years ago jdorgan • 0
38 results • Page 1 of 1
Recent ...
Replies
Answer: WGCNA sample-data preprocessing order by ATpoint ★ 4.6k
Hi, WGCNA is not a Bioconductor package, please read the documentation to get guidance. See https://support.bioconductor.org/p/9155561/. …
Answer: WGCNA: Can we use high power (26) for signed network? by ATpoint ★ 4.6k
Hi, WGCNA is not a Bioconductor package, please read the documentation to get guidance. See https://support.bioconductor.org/p/9155561/. C…
Answer: Ph.D. scholar by ATpoint ★ 4.6k
Hi, WGCNA is not a Bioconductor package, please read the documentation to get guidance. See https://support.bioconductor.org/p/9155561/. C…
Comment: Recount3 data correspond to TCGA data by Fep29 • 0
Hi, This the solution to mapping TCGA ids in Recount3 to the ids used in the TCGA barcodes: library(recount3) human_projects <- …
Answer: Unable to find sample sheet file for ChAMP methylation data analysis by James W. MacDonald 67k
There is an example file in the extdata directory of the `minfiData` package that you could emulate.
Votes
Answer: DESeq2- merging technical vs biological replicates
Answer: SingleCellExperiment convenience function for metadata+expression?
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Answer: EdgeR Biological CVs
Answer: Error in download.file for TCGAutils::symbolsToRanges
Awards • All
Popular Question to shepherl 4.1k
Popular Question to Martin Morgan 25k
Popular Question to Guido Hooiveld ★ 4.1k
Popular Question to Joseph Fass ▴ 70
Popular Question to Peter Hickey ▴ 750
Locations • All
The Netherlands, 36 minutes ago
EMBL Heidelberg, 1 hour ago
India, 1 hour ago
United States, 1 hour ago
Germany, 1 hour ago
Traffic: 808 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6