Showing : biocviews • reset
0
votes
3
replies
1.1k
views
qvalues installation
biocViews
3.2 years ago jdorgan • 0
0
votes
1
reply
1.2k
views
Question about sumbition process and biocviews
biocviews biocparallel github package submission
updated 7.5 years ago by 25k • written 7.5 years ago by ▴ 30
1
vote
1
reply
1.1k
views
How to suggest BiocViews tags for an existing package?
biocviews champ
8.6 years ago Peter Hickey ▴ 740
0
votes
2
replies
3.8k
views
Bioconductor 2.12 is released
BiocViews aCGH SNP Transcription Sequencing Microarray Coverage Alignment Annotation GO
updated 8.8 years ago by • 0 • written 11.1 years ago by ★ 8.2k
0
votes
2
replies
1.8k
views
pdInfoBuilder fails on Affy's GeneChip Human Transcriptome Array 2.0
BiocViews Annotation Organism biocViews oligo oligoClasses BiocViews BiocViews Annotation
updated 9.0 years ago by ▴ 20 • written 10.3 years ago by ▴ 40
1
vote
3
replies
2.4k
views
Probeset/Transcript cluster definitions for HTA2.0 using pdInfoBuilder
BiocViews Annotation Organism biocViews pdInfoBuilder BiocViews BiocViews Annotation
updated 9.7 years ago by 65k • written 9.7 years ago by ▴ 40
0
votes
0
replies
2.1k
views
Affymetrix HTA 2 array analysis
BiocViews Annotation Cancer Breast Organism PROcess biocViews pdInfoBuilder BiocViews
10.0 years ago Elena Serrano ▴ 30
0
votes
0
replies
4.0k
views
Bioconductor 2.14 is released
BiocViews aCGH SNP Sequencing RNASeq ChIPSeq miRNA Microarray qPCR Metabolomics Coverage
10.0 years ago Dan Tenenbaum ★ 8.2k
0
votes
0
replies
3.4k
views
Affymetrix HTA 2 array analysis
BiocViews Annotation Cancer Breast Organism PROcess biocViews pdInfoBuilder BiocViews
10.3 years ago Elena Serrano ▴ 30
0
votes
5
replies
1.8k
views
Complete variant toolbox: gmapR/VariantTools/VariantAnnotation
BiocViews VariantAnnotation Annotation biocViews Rsubread VariantAnnotation gmapR BiocViews
10.4 years ago • updated 10.3 years ago Thomas Girke ★ 1.7k
0
votes
1
reply
2.0k
views
Affymetrix HTA 2 array analysis
BiocViews Annotation Cancer Breast Organism PROcess biocViews pdInfoBuilder BiocViews
updated 10.4 years ago by ★ 4.3k • written 10.4 years ago by ▴ 290
0
votes
0
replies
4.0k
views
Bioconductor 2.13 is released
BiocViews aCGH SNP Transcription Sequencing miRNA Microarray Genetics Proteomics Coverage
10.5 years ago Dan Tenenbaum ★ 8.2k
2
votes
4
replies
2.6k
views
makePdInfoPackage for Primeview arrays
BiocViews Annotation Cancer Organism cdf probe affy biocViews BiocViews BiocViews Cancer
updated 10.9 years ago by ★ 3.9k • written 10.9 years ago by ▴ 140
0
votes
4
replies
1.5k
views
Passing multiple files to pdInfobuilder
BiocViews biocViews pdInfoBuilder BiocViews BiocViews biocViews pdInfoBuilder
updated 11.5 years ago by ▴ 50 • written 11.5 years ago by ★ 13k
0
votes
0
replies
3.1k
views
Bioconductor 2.11 is released
BiocViews SNP Transcription Sequencing miRNA Microbiome Microarray qPCR Genetics Coverage
11.6 years ago Dan Tenenbaum ★ 8.2k
0
votes
1
reply
1.3k
views
AnnotationDbi: NewSchema vignette error
BiocViews miRNA Annotation Cancer Organism biocViews AnnotationDbi BiocViews BiocViews
updated 11.8 years ago by ★ 7.2k • written 11.8 years ago by ▴ 910
0
votes
0
replies
1.3k
views
Nimblegen promoter medip array platform design file problem
BiocViews Annotation Organism biocViews pdInfoBuilder charm BiocViews BiocViews Annotation
12.0 years ago zeynep özkeserli ▴ 160
0
votes
0
replies
1.3k
views
Nimblegen promoter medip array platform design file problem
BiocViews Annotation Organism biocViews pdInfoBuilder charm BiocViews BiocViews Annotation
12.0 years ago zeynep özkeserli ▴ 160
0
votes
2
replies
1.3k
views
oligo package: extracting position, sequence, and intensity from Affymetrix tiling array
BiocViews Organism biocViews oligo pdInfoBuilder BiocViews BiocViews Organism biocViews
updated 12.1 years ago by ★ 4.3k • written 12.1 years ago by ★ 13k
0
votes
0
replies
985
views
makeOrgPackageFromNCBI another error - reversed commands
BiocViews GO Organism ChipName biocViews BiocViews BiocViews GO Organism ChipName
12.1 years ago Guest User ★ 13k
0
votes
1
reply
1.4k
views
makePdInfoPackage Error in sqliteExecStatement(con, statement, bind.data) : , bind.data must have non-zero dimensions
BiocViews Annotation Organism biocViews BiocViews BiocViews Annotation Organism biocViews
updated 12.2 years ago by ★ 4.3k • written 12.2 years ago by ▴ 20
0
votes
0
replies
1.4k
views
Using pdInfoBuilder for Human Exon Array
BiocViews Annotation Organism cdf biocViews oligo pdInfoBuilder BiocViews BiocViews cdf
12.8 years ago Maria Rodrigo-Domingo / Region Nordjyll… ▴ 10
0
votes
4
replies
4.3k
views
An error in oligo: All the CEL files must be of the same type??
BiocViews Annotation Organism biocViews oligo BiocViews BiocViews Annotation Organism
updated 12.9 years ago by ★ 4.3k • written 12.9 years ago by ▴ 20
0
votes
0
replies
1.4k
views
Bioconductor 2.7 is released
BiocViews aCGH Transcription RNASeq miRNA Microarray Normalization Network Bayesian aCGH
13.5 years ago Martin Morgan 25k
0
votes
1
reply
1.5k
views
error fix.by(by.x, x) in Pdinfobuilder package
BiocViews Microarray Annotation Organism biocViews BiocViews BiocViews Microarray Organism
updated 13.5 years ago by ★ 4.3k • written 13.5 years ago by ▴ 60
0
votes
0
replies
1.1k
views
Building AnnotationDbi Packages - Problems when using makeAnnDbPkg
BiocViews Genetics Annotation GO Organism probe biocViews AnnotationDbi BiocViews GO
13.9 years ago Marc Carlson ★ 7.2k
0
votes
0
replies
955
views
Building AnnotationDbi Packages - Problems when using makeAnnDbPkg
BiocViews Genetics Annotation GO Organism biocViews AnnotationDbi BiocViews BiocViews GO
13.9 years ago Julian Lee ▴ 10
0
votes
1
reply
1.6k
views
Affy Gene ST arrays with "oligo"
BiocViews Annotation Organism affy PROcess biocViews BiocViews BiocViews Annotation affy
updated 14.9 years ago by ★ 3.9k • written 14.9 years ago by ▴ 830
0
votes
1
reply
980
views
error while using oligo to build a custom affy cdf
BiocViews cdf affy biocViews BiocViews BiocViews cdf affy biocViews
updated 15.5 years ago by 65k • written 15.5 years ago by ▴ 830
0
votes
3
replies
1.3k
views
inquiry for CDF file
BiocViews biocViews pdInfoBuilder BiocViews BiocViews biocViews pdInfoBuilder
15.6 years ago Rob Dunne ▴ 230
0
votes
0
replies
1.3k
views
Sc03b_MR_v04 CDF package
BiocViews Genetics Yeast cdf probe affy affxparser biocViews oligo pdInfoBuilder Yeast
15.6 years ago Ludo Muller ▴ 50
0
votes
0
replies
1.2k
views
confusion about nomenclature of illumina annotationpackages
BiocViews Annotation Cancer Mus musculus illuminaHumanv1 illuminaHumanv2 probe annotate
15.8 years ago Lynn Amon ▴ 280
0
votes
1
reply
1.7k
views
confusion about nomenclature of illumina annotation packages
BiocViews annotate biocViews BiocViews BiocViews annotate biocViews
updated 15.8 years ago by ▴ 280 • written 15.8 years ago by ▴ 130
0
votes
3
replies
1.4k
views
pd.mapping 10Karray
BiocViews cdf affyio biocViews oligo pdInfoBuilder BufferedMatrix BiocViews BiocViews cdf
updated 16.7 years ago by ★ 7.4k • written 16.7 years ago by ▴ 10
0
votes
0
replies
1.3k
views
BioC 1.9 is released!
BiocViews SNP Microarray Annotation Normalization Visualization Network Infrastructure SNP
17.6 years ago Seth Falcon ★ 7.4k
0
votes
1
reply
917
views
getting a list of packages by biocView tags
BiocViews biocViews BiocViews BiocViews biocViews
updated 17.9 years ago by ★ 7.4k • written 17.9 years ago by ▴ 50
0
votes
0
replies
1.3k
views
Bioconductor 1.8 for R 2.3.0 is released!
BiocViews aCGH SNP Microarray Annotation GO Clustering Cancer Yeast cdf probe RMAGEML
18.0 years ago Seth Falcon ★ 7.4k
37 results • Page 1 of 1
Recent ...
Replies
Answer: Citation for edgeR user guide by Gordon Smyth 50k
Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
You are just making up data? What is the point of this exercise?
Comment: How to retrieve gene ontology GO class? by James W. MacDonald 65k
What do you mean by 'the information'? Do you have things in particular that you want?
Comment: minfi::read.metharray.exp by clacarion • 0
I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…
Comment: minfi::read.metharray.exp by clacarion • 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
Votes
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
Awards • All
Popular Question to Gordon Smyth 50k
Popular Question to i.sudbery ▴ 40
Scholar to Michael Love 41k
Popular Question to shepherl 3.8k
Popular Question to taur.vil • 0
Locations • All
United States, 19 minutes ago
United States, 28 minutes ago
France, 28 minutes ago
United States, 36 minutes ago
WEHI, Melbourne, Australia, 43 minutes ago
Traffic: 602 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6