updated 3 months ago by
Mike Smith
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written 3 months ago by
analeonpalacio
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Comment: Trying to follow a gene set analyisis in R
by
Michael Love
35k
No I can’t help with exercises. Just to be clear I’m not affiliated with Harvard and have no supported effort in relation to the edx classe…
Answer: Problems to find the pvalues via rowttests
by
Gordon Smyth
44k
Ordinary t-tests aren't recommended for genomic analyses because they have poor power and higher false discovery rates.
Using the limma p…
Answer: How to insert a qvalues column in a dataframe with pvalues in R
by
Gordon Smyth
44k
Here and in a previous post, it seems you're not using recommended Bioconductor workflows for Affymetrix microarrays.
If you used a standar…
Comment: Trying to follow a gene set analyisis in R
by
leonardorosas2001
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0
Thank you. I hope I can still let you know if I have issues with your exercises. They are very challenging but useful! :)
Comment: plyranges select() when a metadata column is shared with core variable
by
Michael Love
35k
Another `select()` issue, I think the error here could be instead about the missing metadata column:
```
> gr <- as_granges(data.frame(seq…
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