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Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
ATpoint
★
4.0k
As expected normalization is **way** off, meaning in simple terms that the cloud is too high. The deep-blue area should be along y=0. Try t…
Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
lonn
•
0
Thank you for your suggestions! Here is the MA plot:
![enter image description here][1]
I tried several normalization methods with DiffBi…
Answer: OrgDb for maize
by
Guido Hooiveld
★
3.9k
I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …
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