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biomaRt

updated 4 days ago by James W. MacDonald 65k • written 4 days ago by bas_work ▴ 30

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clusterProfiler OrgDb biomaRt Zea_mays

updated 4 days ago by James W. MacDonald 65k • written 5 days ago by sansan • 0

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biomaRt

updated 21 days ago by James W. MacDonald 65k • written 21 days ago by Reeya • 0

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biomart rnaseq

written 5.2 years ago by jarod_v6@libero.it ▴ 40

4 results • Page 1 of 1

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Comment: minfi::read.metharray.exp by clacarion • 0

I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…

Comment: minfi::read.metharray.exp by clacarion • 0

Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…

Answer: List of Deprecated Packages for Bioc3.19 by shepherl 3.8k

singleCellTK has been fixed and will remain in Bioconductor

Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10

Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…

Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10

Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…

Votes

Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)

Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.

Answer: minfi::read.metharray.exp

Comment: Trying to use enrichGO

Answer: Cannabis OrgDb

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