Bioconductor Biovizbase

Showing : biovizbase • reset

votes

replies

502

views

biovizBase ggbio

updated 3.2 years ago by James W. MacDonald 63k • written 3.2 years ago by moldach ▴ 20

votes

replies

778

views

ggbio biovizBase

7.0 years ago kevin.rue ▴ 320

votes

replies

3.1k

views

biovizbase installation

updated 8.5 years ago by Dan Tenenbaum ★ 8.2k • written 8.5 years ago by ville.q.rantanen • 0

votes

replies

1.4k

views

annotate biovizBase ggbio UniProt.ws Pbase annotate biovizBase ggbio UniProt.ws Pbase

updated 8.8 years ago by Tengfei Yin ▴ 490 • written 8.8 years ago by Laurent Gatto 1.6k

votes

replies

1.5k

views

TranscriptDb biovizBase ggbio TranscriptDb biovizBase ggbio

updated 9.6 years ago by Tengfei Yin ▴ 490 • written 9.6 years ago by Malcolm Cook ★ 1.6k

5 results • Page 1 of 1

Recent ...

Replies

Comment: Extract Limma Adjusted Values for Plotting by ATpoint ★ 2.9k

Yes, with normalized counts on log2 scale.

Comment: Adjusting for baseline when having longitudinal data, mixed model and no treat by Anna ▴ 20

A no I never referred to transcriptomic data when I was talking about "standard procedure" I was referring to the way we analyze longitudin…

Answer: BiocManager Package installs by shepherl 3.5k

We don't control the mirrors. You would have to contact the maintainer of the mirror you are using. Likely the maintainer of the mirror mi…

Comment: No compilation on Windows y compilation on linux by Franck RICHARD • 0

Thanks shepherl

Comment: Adjusting for baseline when having longitudinal data, mixed model and no treat by Gordon Smyth 47k

Perhaps you are thinking of data analyses where the dependent variable is something other than expression itself. In the context of gene e…

Votes

A: Ranges from a fasta file

Answer: NA transcript values in my Txdb

Comment: Interpret plot from DiffBind

Answer: Use with_go along with other filters in getBM function

Awards • All

Scholar to Mike Smith ★ 6.0k