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Nonorthogonal multiple comparisons in Limma/ Books on Bayesian Statistics
Bayesian
Classification
limma
bridge
Bayesian
Classification
limma
bridge
19.7 years ago
Gordon Smyth
50k
0
votes
3
replies
1.2k
views
chippeakanno:::addGeneID for adding gene symbol etc. to annotatedPeak or enrichedGO
Annotation
convert
biomaRt
bridge
ChIPpeakAnno
Annotation
convert
biomaRt
bridge
updated 12.6 years ago by
Andreia Fonseca
▴ 810 • written 12.7 years ago by
Julie Zhu
★ 4.3k
0
votes
3
replies
1.5k
views
AnnBuilder/ABPkgBuilder: lots of Errors
Annotation
GO
Cancer
Organism
Biobase
annotate
AnnBuilder
PROcess
bridge
Annotation
GO
updated 19.6 years ago by
John Zhang
★ 2.9k • written 19.6 years ago by
Floor Stam
▴ 90
1
vote
3
replies
2.1k
views
views on Rle using GRanges object
RNASeq
Coverage
GO
Cancer
bridge
rtracklayer
IRanges
RNASeq
Coverage
GO
Cancer
bridge
updated 10.0 years ago by
Hervé Pagès
16k • written 10.0 years ago by
Michael Lawrence
★ 11k
0
votes
2
replies
3.4k
views
failure in GDS2eSet() in package GEOquery
Microarray
OneChannel
TwoChannel
DataImport
bridge
GEOquery
Microarray
OneChannel
bridge
updated 16.4 years ago by
Sean Davis
21k • written 16.4 years ago by
Wittner, Ben
▴ 290
0
votes
0
replies
673
views
chippeakanno related
Annotation
annotate
convert
biomaRt
bridge
Annotation
annotate
convert
biomaRt
bridge
12.7 years ago
Julie Zhu
★ 4.3k
0
votes
0
replies
1.1k
views
ensemblVEP, variant_effect_predictor versions and release schedule
Cancer
MLInterfaces
bridge
ensemblVEP
AnnotationHub
Cancer
MLInterfaces
bridge
ensemblVEP
10.2 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
758
views
anybody parsing BioPAX 2?
bridge
bridge
13.8 years ago
Emek Demir
▴ 10
0
votes
0
replies
883
views
Nonorthogonal multiple comparisons in Limma/ Books on Bayesian Statistics
Bayesian
Cancer
limma
bridge
Bayesian
Cancer
limma
bridge
19.7 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
779
views
The anion is a six-coordinate complex with a distorted octahedral geometry around NiII.
bridge
inveRsion
bridge
inveRsion
16.8 years ago
Bean Y. Nat
▴ 10
0
votes
0
replies
2.1k
views
Prestigious Research Fellowship in Biostatistics/Bioinformatics
Microarray
Survival
Infrastructure
Cancer
Breast
bridge
Microarray
Survival
Infrastructure
19.8 years ago
Wei, Wenbin
▴ 50
0
votes
0
replies
791
views
chippeakanno related
Annotation
convert
biomaRt
bridge
Annotation
convert
biomaRt
bridge
12.7 years ago
Julie Zhu
★ 4.3k
12 results • Page
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Answer: New genes that did not exist in dds object suddenly showed up after degPatterns
by
Michael Love
41k
May be documented by the software you are using? https://github.com/lpantano/DEGreport
Answer: Doing comparison of RNA-seq data using Deseq2
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Michael Love
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Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
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This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
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mercedeh.movassagh
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Yes that is correct
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by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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