Bioconductor Bsgenome.hsapiens.ucsc.hg19

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BSgenome.Hsapiens.UCSC.hg19 AnnotationDbi

6 months ago Erica • 0

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BSgenome.Hsapiens.UCSC.hg19 rtracklayer AnnotationHub

20 months ago • updated 19 months ago Lenny186 • 0

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BSgenome.Hsapiens.UCSC.hg19

updated 2.1 years ago by Hervé Pagès 16k • written 2.1 years ago by Bogdan ▴ 670

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BSgenome.Hsapiens.UCSC.hg19

updated 3.1 years ago by Cheyujlee • 0 • written 3.4 years ago by pegah.taklifi ▴ 30

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BSgenome.Hsapiens.UCSC.hg19 HarvardX Introduction to Bioconductor

updated 22 months ago by James W. MacDonald 65k • written 3.6 years ago by m.steinruecke • 0

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matchProbePair BSgenome Biostrings BSgenome.Hsapiens.UCSC.hg19

updated 4.9 years ago by James W. MacDonald 65k • written 4.9 years ago by svetlana.gorokhova • 0

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bsgenome.hsapiens.ucsc.hg19 hg19

updated 6.4 years ago by Mike Smith ★ 6.5k • written 6.4 years ago by addyS • 0

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ucsc bsgenome.hsapiens.ucsc.hg19

updated 8.1 years ago by Martin Morgan 25k • written 8.1 years ago by Sushant Pawar • 0

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BSgenome.Hsapiens.UCSC.hg19

updated 8.5 years ago by Hervé Pagès 16k • written 8.5 years ago by Julie Zhu ★ 4.3k

9 results • Page 1 of 1

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Comment: FilterByExpr low counts with small sample size by Gordon Smyth 50k

As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…

Comment: Batch correction and repeated measures by Gordon Smyth 50k

In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…

Comment: Methylation Analysis experiment design using Limma by Gordon Smyth 50k

I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…

Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0

Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…

Comment: Single-Cell Data Simulation from Bulk RNA-seq by wichaidi • 0

Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.

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Answer: How many of my genes from my gene list are in each KEGG pathway?

Comment: Light difference when using coef vs omit a group when compare 3 groups.

DESeq2 variance transformation error and plot dispersion Estimate

A: DESeq2 variance transformation error and plot dispersion Estimate

ensembl to hgnc symbols creates duplicates

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