Bioconductor Bsgenome.hsapiens.ucsc.hg38

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annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38

updated 5.9 years ago by kayla.interdonato ▴ 160 • written 5.9 years ago by jam526 • 0

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BSgenome BSgenome.Hsapiens.UCSC.hg38 Offline

updated 14 months ago by James W. MacDonald 68k • written 14 months ago by firestar ▴ 20

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BSgenome.Hsapiens.UCSC.hg38

updated 5.0 years ago by ahorn720 ▴ 10 • written 5.0 years ago by rohitsatyam102 ▴ 20

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914

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BSgenome.Hsapiens.UCSC.hg38 BSgenome.Hsapiens.UCSC.hg38.masked

3.7 years ago Bogdan ▴ 670

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1.5k

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HiCDCPlus BSgenome.Hsapiens.UCSC.hg38

updated 2.6 years ago by merve.sahn • 0 • written 3.1 years ago by Yue • 0

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org.Hs.eg.db BSgenome.Hsapiens.UCSC.hg38

5.0 years ago Konstantinos Yeles ▴ 90

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intron BSgenome.Hsapiens.UCSC.hg38 BSgenome

updated 2.6 years ago by ATpoint ★ 5.0k • written 2.6 years ago by Lillian • 0

7 results • Page 1 of 1

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Comment: Upcoming Ensembl API and data access changes - new blog post available by Hugo Gruson • 0

Thanks for the update. To be very explicit: what is going to happen to the Biomart service, on which the biomaRt bioconductor package relie…

Comment: Are individual-mouse-based statistics possible in CellChat? by LillianaVolkman99 • 0

thank you very much. https://www.biostars.org/p/9617271/

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Gordon Smyth 53k

My apologies, I forgot that `design.group` is not included in the final matrix, because the baseline group effects are already captured by …

Answer: Bile acid analysis with limpa by Gordon Smyth 53k

I am not familiar with targeted HPLC-MS and I don't know what you mean by "peak areas". If it produces standard format mass spec data from …

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by chp265 • 0

Confirming my understanding after executing the code provided: this is similar to a design formula of `~0+mouse+group+group:allele`, except…

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A: DESeq2: Is it possible to convert read counts to expression values via TPM and r

A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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