Bioconductor Bsseq

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bsseq

updated 7 months ago by Peter Hickey ▴ 740 • written 8 months ago by richardallenfriedmanbrooklyn ▴ 20

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341

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dmrseq bsseq

updated 6 days ago by Peter Hickey ▴ 740 • written 13 days ago by Juan Higareda • 0

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2.6k

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Coverage bsseq

updated 6 months ago by Adam • 0 • written 9.6 years ago by Guest User ★ 13k

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2.5k

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bsseq Bsmooth

updated 6 months ago by Adam • 0 • written 9.2 years ago by unmeshj • 0

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140

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bsseq methylation

updated 22 days ago by James W. MacDonald 65k • written 24 days ago by ja569116 • 0

5 results • Page 1 of 1

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Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k

This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…

Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0

I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…

Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by shuwangxinze1996 • 0

Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough?

Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k

This comment helps.

Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k

I am not sure how your comment helps here?

Votes

A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?

A: How to explain how DESeq2 works to someone with zero bioinformatics background?

Answer: Interpret plot from DiffBind

Answer: How to retrieve gene ontology GO class from gene list?

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Supporter to JKim • 0