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bufferedmatrix
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Reading CEL files in using BufferedMatrix.justRMA
BufferedMatrix
BufferedMatrix
11.2 years ago
Emma Reick
▴ 10
0
votes
0
replies
741
views
Creating one matrix of intensity data from 4 diffrent CEL files
Normalization
cdf
probe
affy
BufferedMatrix
Normalization
cdf
probe
affy
BufferedMatrix
14.8 years ago
Radhika Ambatipudi
▴ 20
0
votes
0
replies
880
views
Oligo package and tiling arrays - PM and MM
cdf
affyio
oligo
BufferedMatrix
cdf
affyio
oligo
BufferedMatrix
16.4 years ago
Naira Naouar
▴ 140
0
votes
3
replies
1.4k
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pd.mapping 10Karray
BiocViews
cdf
affyio
biocViews
oligo
pdInfoBuilder
BufferedMatrix
BiocViews
BiocViews
cdf
updated 16.7 years ago by
Seth Falcon
★ 7.4k • written 16.7 years ago by
Marianne Tuefferd
▴ 10
0
votes
1
reply
1000
views
Problem with snprma
SNP
Biobase
oligo
BufferedMatrix
SNP
Biobase
oligo
BufferedMatrix
updated 16.9 years ago by
Benilton Carvalho
★ 4.3k • written 16.9 years ago by
OLIVIERNUÑEZ
▴ 80
5 results • Page
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Comment: get BM error
by
Fara
• 0
Thank you for your response. The primary reason for translating Ensembl IDs into Entrez Gene IDs is to perform KEGG (Kyoto Encyclopedia of…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
by
James W. MacDonald
65k
That's weird. I don't have any problem at all generating the `OrgDb` on my box. How big is the gene2pubmed.gz file? I get this: ``` gzip -…
Answer: get BM error
by
James W. MacDonald
65k
The genes you present are orthologous mappings from D. rerio to other teleost fishes, so it is probably going to be difficult to map to NCB…
Answer: How to retrieve gene ontology GO class from gene list?
by
James W. MacDonald
65k
You can also use a combination of the `org.Hs.eg.db` and `GO.db` packages. ``` > library(GO.db) > library(org.Hs.eg.db) > go <- m…
Comment: Different Shrunk Log2FC according with reference
by
Michael Love
41k
I took a look and the posterior width for these (fairly rare) examples overlaps zero. So the posterior when it disagrees is not narrow. An…
Votes
Answer: get BM error
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
Comment: Different Shrunk Log2FC according with reference
Reproducibility issue with scran together with lapply and BiocParallel
C: SGSeq: moving toward diffex from SGSeq analysis
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