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cager cage ctss

updated 3.9 years ago by Charles Plessy ▴ 180 • written 4.8 years ago by sarac ▴ 20

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CAGEfightR CAGE

updated 4.8 years ago by maltethodberg ▴ 170 • written 4.8 years ago by sarac ▴ 20

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CAGEFightR CAGE CTSS

5.0 years ago July • 0

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TSS promoter cage cager

5.4 years ago bharata1803 ▴ 60

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CAGEr cage

updated 2.6 years ago by jingxian.18 • 0 • written 8.2 years ago by Vivek.b ▴ 100

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Comment: minfi::read.metharray.exp by clacarion • 0

I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…

Comment: minfi::read.metharray.exp by clacarion • 0

Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…

Answer: List of Deprecated Packages for Bioc3.19 by shepherl 3.8k

singleCellTK has been fixed and will remain in Bioconductor

Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10

Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…

Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10

Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…

Votes

Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.

Answer: minfi::read.metharray.exp

Comment: Trying to use enrichGO

Answer: Cannabis OrgDb

DESeq2: How to find out how well the model fits the data?

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