Showing : cager • reset
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Spam: Can I cancel my British Airways flight and get a refund?
CAGEr gep2pep hcg110.db
10 months ago Haggu 10
6
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8
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2.1k
views
CAGEr bug report: wrong consensus cluster results
CAGEr
updated 2.5 years ago by ▴ 180 • written 3.1 years ago by ▴ 30
0
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3
replies
1.5k
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CAGEr: Problem when running getCTSS
CAGEr
updated 4.2 years ago by ▴ 180 • written 4.4 years ago by • 0
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0
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758
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CAGEr consensusClustersDESeq2()
CAGEr
4.8 years ago MatteoP ▴ 10
1
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2
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1.3k
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CAGEexp vs CAGErseq
CAGEr
updated 4.2 years ago by ▴ 180 • written 4.8 years ago by ▴ 10
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5
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1.7k
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CAGEr promoter width graph
CAGEr
updated 4.4 years ago by • 0 • written 5.3 years ago by • 0
1
vote
4
replies
1.4k
views
CAGEr quantilePositions() takes forever to run
CAGEr quantilePositions
5.7 years ago mirkocelii ▴ 40
1
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3
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1.4k
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CAGEr: Quantile Values (q_0.1 and q_0.9) in CAGEset / CAGEexp objects
CAGEr CAGEset quantile CAGEexp
5.7 years ago mirkocelii ▴ 40
4
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6
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1.9k
views
CAGEr - Error with aggregateTagClusters() - invalid class IRanges object: width(x) cannot contain negative integers
CAGEr IRanges aggregateTagClusters
5.7 years ago mirkocelii ▴ 40
1
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6
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2.0k
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Behaviour of getCTSS on a CAGEset - extra reads?
cager cage ctss
updated 5.7 years ago by ▴ 180 • written 6.5 years ago by ▴ 20
2
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5
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2.0k
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Does `clusterCTSS` and `aggregateTagClusters` sum raw-tag counts (and tpm) of the clustered tags into the resultant cluster?
CTSS clustering tag per million tag counts CAGEr
updated 4.2 years ago by ▴ 180 • written 6.6 years ago by • 0
0
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0
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1.4k
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CAGEr get TSS in bed file
TSS promoter cage cager
7.2 years ago bharata1803 ▴ 60
0
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1
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1.3k
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a problem from import CTSStable in CAGEr
cager CAGEr
7.2 years ago Zhong JW • 0
1
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2
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1.8k
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error: getCTSS from CAGEexp class with removeFirstG=TRUE
cager
7.3 years ago Pengcheng Yang ▴ 60
9
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18
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3.4k
views
bam2CTSS function error from CAGEr package
cager
7.3 years ago Pengcheng Yang ▴ 60
4
votes
5
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1.8k
views
no import.bam function in CAGEr version 1.22.3
cager
7.3 years ago Pengcheng Yang ▴ 60
1
vote
1
reply
1.3k
views
CAGEr: consensusCluster doesn't have dominant CTSS info
cager
7.6 years ago Jingwen ▴ 10
1
vote
1
reply
1.5k
views
clusterCTSS() error when running CAGEr
CAGEr
updated 8.3 years ago by ▴ 180 • written 8.3 years ago by ▴ 10
2
votes
8
replies
2.8k
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CAGEr BAM files size issue
CAGEr BAM software error R biostrings
updated 8.5 years ago by ▴ 180 • written 8.5 years ago by ▴ 10
4
votes
5
replies
2.8k
views
CAGEr : problem while filtering the bamFile
CAGEr cage
updated 4.4 years ago by • 0 • written 9.9 years ago by ▴ 100
0
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1
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1.4k
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Scale Y-axis in "plotInterquantileWidth" function for an easier comparison between conditions
CAGEr
updated 11.0 years ago by 68k • written 11.0 years ago by • 0
0
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1
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1.5k
views
CAGEr - How to change plot axis range in CAGEr
BRAIN CAGEr BRAIN CAGEr
updated 7.7 years ago by ▴ 180 • written 11.5 years ago by ▴ 10
22 results • Page 1 of 1
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Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k
Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/
Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k
apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k
I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0
Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…
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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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