Bioconductor Cager

Showing : cager • reset

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2.9k

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cager

6.5 years ago Pengcheng Yang ▴ 60

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1.7k

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CAGEr

updated 20 months ago by Charles Plessy ▴ 180 • written 2.3 years ago by Meng ▴ 30

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2.4k

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CAGEr BAM software error R biostrings

updated 7.6 years ago by Charles Plessy ▴ 180 • written 7.7 years ago by orzechowska.mag ▴ 10

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1.6k

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cager cage ctss

updated 4.9 years ago by Charles Plessy ▴ 180 • written 5.7 years ago by sarac ▴ 20

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1.6k

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CAGEr IRanges aggregateTagClusters

4.9 years ago mirkocelii ▴ 40

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1.6k

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CTSS clustering tag per million tag counts CAGEr

updated 3.3 years ago by Charles Plessy ▴ 180 • written 5.8 years ago by regcastillo1990 • 0

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2.4k

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CAGEr cage

updated 3.5 years ago by jingxian.18 • 0 • written 9.1 years ago by Vivek.b ▴ 100

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1.4k

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CAGEr

updated 3.6 years ago by Charles • 0 • written 4.5 years ago by leehami7407 • 0

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1.5k

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cager

6.5 years ago Pengcheng Yang ▴ 60

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1.1k

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CAGEr quantilePositions

4.8 years ago mirkocelii ▴ 40

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CAGEr CAGEset quantile CAGEexp

4.9 years ago mirkocelii ▴ 40

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1.3k

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CAGEr

updated 3.4 years ago by Charles Plessy ▴ 180 • written 3.6 years ago by Sergio • 0

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1.6k

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cager

6.5 years ago Pengcheng Yang ▴ 60

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1.1k

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CAGEr

updated 3.4 years ago by Charles Plessy ▴ 180 • written 4.0 years ago by MatteoP ▴ 10

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1.1k

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cager CAGEr

6.4 years ago Zhong JW • 0

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1.3k

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BRAIN CAGEr BRAIN CAGEr

updated 6.9 years ago by Charles Plessy ▴ 180 • written 10.6 years ago by Tobias Hohenauer ▴ 10

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1.2k

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CAGEr

updated 10.1 years ago by James W. MacDonald 68k • written 10.1 years ago by calibula2000 • 0

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1.2k

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CAGEr

updated 7.4 years ago by Charles Plessy ▴ 180 • written 7.4 years ago by bo_yan ▴ 10

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1.1k

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cager

6.8 years ago Jingwen ▴ 10

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612

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CAGEr

4.0 years ago MatteoP ▴ 10

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1.2k

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TSS promoter cage cager

6.3 years ago bharata1803 ▴ 60

21 results • Page 1 of 1

Recent ...

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Comment: DiffBind custom normalization factor by Abbie • 0

Hello! Thanks so much for adding dba.normalize and all the documentation in the manual! I'm hoping I can ask a follow-up question here. I…

Answer: CpGs with genomic positions greater than the chromosome size in EPICv2? by James W. MacDonald 68k

All of the annotation packages provided by Bioconductor are simply repackaging of existing data from one or more sources. In this case, the…

Comment: Using TPM from tximport of Salmon output for singscore by Kent • 0

Thank you for the suggestions Michael. Would you say that after filtering out the low count genes, `rlog(counts, blind = T)` is doing the s…

Comment: Using TPM from tximport of Salmon output for singscore by Michael Love 43k

For clustering generally we recommend `vst()` see the workflow for example. For working with individual samples, I can see how a scaling/t…

Comment: DESeq2 model - How to test case/control time course model when taking account wi by Michael Love 43k

I'd recommend working with a local statistician or someone familiar with linear models in R. I have to reserve my time on the support site …

Votes

clusterProfiler-GO enrichment Error

A: Machine learning in R book

Data preparation and Machine learning on time course RNAseq data

Answer: Use of org.Rn.eg.db with GRCr8 reference genome

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Popular Question to Dario Strbenac ★ 1.6k