Showing : cdf • reset
0
votes
2
replies
1.2k
views
problem with CoCiteStats in bioC 1.8
cdf reposTools affy CoCiteStats affyio cdf reposTools affy CoCiteStats affyio
updated 19.5 years ago by ★ 7.4k • written 19.5 years ago by ▴ 890
0
votes
0
replies
844
views
justGCRMA error in BioC 1.8
cdf affy gcrma matchprobes cdf affy gcrma matchprobes
19.5 years ago echang4@life.uiuc.edu ▴ 110
0
votes
0
replies
1.6k
views
Bioconductor 1.8 for R 2.3.0 is released!
BiocViews aCGH SNP Microarray Annotation GO Clustering Cancer Yeast cdf probe RMAGEML
19.5 years ago Seth Falcon ★ 7.4k
0
votes
1
reply
1.1k
views
Fusarium CDF
cdf makecdfenv cdf makecdfenv
updated 19.5 years ago by 68k • written 19.5 years ago by ▴ 30
0
votes
3
replies
1.8k
views
error in mas5calls() for soybean chip
Survival hu6800 cdf probe Biobase genefilter reposTools affy affydata limma gcrma made4
updated 19.6 years ago by ▴ 70 • written 19.6 years ago by ★ 2.2k
0
votes
2
replies
1.2k
views
affy package and porcine arrays
cdf affy cdf affy
19.6 years ago David Carter ▴ 50
0
votes
0
replies
1.6k
views
Problems using text to subset array information from anexpression set
Cancer cdf reposTools affy PROcess Cancer cdf reposTools affy PROcess
19.6 years ago Alvord, Greg DMS [Contr] ▴ 160
0
votes
4
replies
1.8k
views
Problems using text to subset array information from an expression set
cdf reposTools affy PROcess cdf reposTools affy PROcess
updated 19.6 years ago by ★ 4.3k • written 19.6 years ago by ▴ 110
0
votes
1
reply
803
views
affy package and porcine arrays
cdf affy cdf affy
updated 19.6 years ago by ★ 6.5k • written 19.6 years ago by ▴ 50
0
votes
0
replies
910
views
yeast2cdf qc.affy(unnormalised, ) I'm Sorry Error: - help,
yeast2 cdf yeast2 cdf
19.6 years ago Saurin D. Jani ▴ 360
0
votes
3
replies
1.4k
views
Envir. drosgenome1, GENENAME not defined?
GO drosgenome1 cdf annotate affy GO drosgenome1 cdf annotate affy
updated 19.6 years ago by ▴ 780 • written 19.6 years ago by ▴ 270
0
votes
0
replies
954
views
lost inherent methods of hist() for AffyBatch objects
cdf Biobase affy cdf Biobase affy
19.6 years ago Jenny Drnevich ★ 2.2k
0
votes
0
replies
765
views
simpleAffy and bovinecdf
cdf cdf
19.6 years ago D.Enrique ESCOBAR ESPINOZA ▴ 360
0
votes
2
replies
1.8k
views
Package installation problem...
hgu133plus2 cdf hgu133plus2 cdf
updated 19.7 years ago by 68k • written 19.7 years ago by ▴ 10
0
votes
0
replies
1.3k
views
Error with CDF environment when using combineAffyBatch of pac kage matchprobes - mas5
Normalization cdf affy matchprobes Normalization cdf affy matchprobes
19.7 years ago Christian.Stratowa@vie.boehringer-ingel… ▴ 270
0
votes
0
replies
900
views
Error with CDF environment when using combineAffyBatch of package matchprobes
Microarray Cancer cdf matchprobes Microarray Cancer cdf matchprobes
19.7 years ago Christian.Stratowa@vie.boehringer-ingel… ▴ 270
0
votes
2
replies
2.0k
views
Error with CDF environment when using combineAffyBatch of package matchprobes
cdf affy matchprobes cdf affy matchprobes
updated 19.7 years ago by ★ 13k • written 19.7 years ago by ▴ 270
0
votes
1
reply
932
views
Unable to get expression-values from cel-files of yeast
Yeast cdf affy Yeast cdf affy
updated 19.7 years ago by 68k • written 19.7 years ago by ▴ 10
0
votes
2
replies
836
views
makePlatformDesign for 10k Array
cdf cdf
updated 19.7 years ago by ★ 4.3k • written 19.7 years ago by ▴ 30
0
votes
2
replies
1.3k
views
justRMA using incorrect default cdf
GO Survival rat2302 cdf annotate genefilter affy limma affycoretools GO Survival cdf
19.8 years ago • updated 19.7 years ago Kimpel, Mark W ▴ 890
0
votes
0
replies
935
views
hgu133plus2cdf
hgu133plus2 cdf hgu133plus2 cdf
19.8 years ago Seth Falcon ★ 7.4k
0
votes
0
replies
696
views
MG_U74A version 1 sequence info
cdf probe cdf probe
19.8 years ago Victoria Perreau ▴ 20
0
votes
1
reply
824
views
justRMA/GCRMA and alternative cdfs
Microarray Cancer cdf probe affy Microarray Cancer cdf probe affy
19.8 years ago James W. MacDonald 68k
0
votes
5
replies
1.5k
views
Re-mapped Affy CDF files
Microarray Cancer cdf probe affy Microarray Cancer cdf probe affy
19.8 years ago James W. MacDonald 68k
0
votes
0
replies
744
views
MixtureCDF
Cancer hgu133a2 hgu133a cdf PROcess Cancer hgu133a2 hgu133a cdf PROcess
19.8 years ago Jack Zhu ▴ 30
0
votes
1
reply
885
views
justRMA and custom CDF
cdf cdf
updated 19.9 years ago by 68k • written 19.9 years ago by ▴ 500
0
votes
1
reply
1.2k
views
rbind in annaffy problem
GO hgu95av2 rat2302 cdf annotate affy graph annaffy RBGL GOstats biomaRt GO hgu95av2
updated 19.9 years ago by 68k • written 19.9 years ago by ▴ 890
0
votes
3
replies
1.3k
views
Affy autodownload cdf problem
cdf affy cdf affy
updated 19.9 years ago by ★ 7.4k • written 19.9 years ago by 21k
0
votes
0
replies
1.2k
views
getGene in biomaRt package
Microarray Cancer cdf biomaRt Vega Microarray Cancer cdf biomaRt Vega
20.0 years ago sdurinck ▴ 40
0
votes
0
replies
836
views
getGene in biomaRt package
Microarray Cancer cdf biomaRt Microarray Cancer cdf biomaRt
20.0 years ago James W. MacDonald 68k
0
votes
2
replies
1.3k
views
SimpleAffy: problem with Yeast Genome 2.0 Array
Yeast cdf simpleaffy Yeast cdf simpleaffy
updated 20.0 years ago by ★ 2.2k • written 20.0 years ago by ▴ 170
0
votes
3
replies
1.5k
views
makepackage of affy's 100K and 500K SNP chip
SNP cdf SNP cdf
updated 20.0 years ago by ▴ 220 • written 20.0 years ago by ▴ 60
0
votes
0
replies
647
views
Celegans data package?
cdf cdf
20.0 years ago Wolfgang Huber ★ 13k
0
votes
0
replies
947
views
How to retrieve the intensity of probes (PM and MM) and the order of probes in the probe set?
cdf probe matchprobes cdf probe matchprobes
20.0 years ago szhan@uoguelph.ca ▴ 50
0
votes
2
replies
1.5k
views
Glyco gene chip
cdf affy cdf affy
updated 20.0 years ago by 68k • written 20.0 years ago by ▴ 100
0
votes
5
replies
1.9k
views
PLIER affinities redux
cdf probe Biobase affy plier cdf probe Biobase affy plier
updated 20.0 years ago by ★ 1.1k • written 20.1 years ago by ▴ 60
0
votes
0
replies
1.1k
views
PLIER affinities redux
ath1121501 cdf probe Biobase affy plier ath1121501 cdf probe Biobase affy plier
20.1 years ago Matthew Hannah ▴ 940
0
votes
1
reply
682
views
bg.adjust.gcrma
cdf affy gcrma cdf affy gcrma
updated 20.1 years ago by 68k • written 20.1 years ago by ▴ 10
0
votes
1
reply
1.1k
views
PLIER affinities
rae230a cdf probe reposTools affy plier rae230a cdf probe reposTools affy plier
updated 20.1 years ago by 68k • written 20.1 years ago by ▴ 80
0
votes
0
replies
835
views
memory problems on IRIX machine
cdf reposTools affy cdf reposTools affy
20.1 years ago Jenny Drnevich ★ 2.2k
0
votes
0
replies
784
views
Q: phantom probsets created by combineAffyBatch?
cdf affy matchprobes cdf affy matchprobes
20.1 years ago C. Charles Gu ▴ 10
0
votes
2
replies
1.3k
views
CEL file conversion for custom CDF arrays gives segmentation fault when run
cdf cdf
updated 20.1 years ago by ★ 1.1k • written 20.1 years ago by ▴ 30
0
votes
2
replies
828
views
Help on mapping10xba142
cdf oligo cdf oligo
updated 20.1 years ago by 68k • written 20.1 years ago by ▴ 60
0
votes
2
replies
1.5k
views
Matchprobe package
cdf probe gcrma cdf probe gcrma
updated 20.2 years ago by ▴ 120 • written 20.2 years ago by ★ 13k
0
votes
2
replies
1.1k
views
creating cdf environment Correction
cdf affy cdf affy
updated 20.2 years ago by 68k • written 20.2 years ago by ▴ 20
0
votes
0
replies
800
views
creating cdf environment
cdf affy cdf affy
20.2 years ago Carol Hannam ▴ 20
0
votes
2
replies
1.5k
views
How do I install custom made CDF in Bioconductor
cdf cdf
updated 20.2 years ago by 68k • written 20.2 years ago by ▴ 270
0
votes
0
replies
1.2k
views
How do I install custom made CDF in Bioconductor
cdf makecdfenv cdf makecdfenv
20.2 years ago Ruppert Valentino ▴ 270
0
votes
1
reply
1.2k
views
Mapping CDF from different array platforms
cdf affy altcdfenvs cdf affy altcdfenvs
updated 20.2 years ago by 21k • written 20.2 years ago by ▴ 30
0
votes
0
replies
862
views
moe430a and moe430av2 comparison
moe430a cdf probe reposTools affy moe430a cdf probe reposTools affy
20.3 years ago Margaret Gardiner-Garden ▴ 160
927 results • Page 13 of 19
Recent ...
Replies
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts by Michael Love 43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts by empty_mt • 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
Comment: deseq2 filter the low counts by Michael Love 43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
Votes
Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
Awards • All
Popular Question to shepherl 4.2k
Popular Question to Hervé Pagès 16k
Popular Question to Ou, Jianhong ★ 1.3k
Popular Question to Maria Doyle ▴ 100
Popular Question to Gordon Smyth 53k
Locations • All
China, 30 minutes ago
The city by the bay, 2 hours ago
Barcelona, Spain, 4 hours ago
Finland, 6 hours ago
United States, 7 hours ago
Traffic: 820 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6