Bioconductor Celegans

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1.6k

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Gviz celegans

updated 6.2 years ago by Robert Ivanek ▴ 730 • written 6.2 years ago by alex.gos90 ▴ 10

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1.4k

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biomaRt bioconductor celegans annotation

updated 6.3 years ago by Mike Smith ★ 6.5k • written 6.3 years ago by clarisbaby • 0

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963

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Transcription GO celegans BSgenome Biostrings BSgenome IRanges Transcription GO celegans

updated 14.2 years ago by Sean Davis 21k • written 14.2 years ago by Paul Shannon ★ 1.1k

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940

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BSgenome Celegans

updated 2.0 years ago by Hervé Pagès 16k • written 2.0 years ago by Tsung-Han • 0

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935

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celegans Biostrings celegans Biostrings

updated 15.4 years ago by Hervé Pagès 16k • written 15.4 years ago by Elizabeth Purdom ▴ 210

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845

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celegans celegans

17.0 years ago Gordon Smyth 50k

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743

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celegans affy convert celegans affy convert

updated 13.6 years ago by Marc Carlson ★ 7.2k • written 13.6 years ago by Julie Zhu ★ 4.3k

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685

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Microarray Cancer celegans drosgenome1 affy Microarray Cancer celegans drosgenome1 affy

20.6 years ago James W. MacDonald 65k

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Celegans DESeq2 dds Errorinseq_len(length(idx)-1)

updated 17 months ago by James W. MacDonald 65k • written 17 months ago by Enzo.Scifo • 0

9 results • Page 1 of 1

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Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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