Showing : champdata • reset
0
votes
2
replies
859
views
Error myDMP not found
Illumina methylationArrayAnalysis ChAMPdata ChAMP
3.2 years ago sissialva21 • 0
0
votes
2
replies
1.2k
views
Trouble Loading Data into Champ
loaddata ChAMPdata champload R ChAMP
updated 10 months ago by • 0 • written 3.1 years ago by • 0
2
votes
5
replies
1.8k
views
Problem at champ.load
ChAMPdata ChAMP
updated 5 weeks ago by 65k • written 12 months ago by • 0
0
votes
0
replies
177
views
how to solve this error?
ChAMPdata ChAMP
8 weeks ago Meghana • 0
0
votes
2
replies
1.2k
views
Why the order of sample names in the beta matrix affect the analysis results of Champ.DMP? What should I do?
ChAMP limma Bioconductor ChAMPdata
2.7 years ago • updated 2.6 years ago Jinyue • 0
2
votes
1
reply
1.2k
views
How to download the ChAMP dependency ChAMPdata
ChAMP ChAMPdata
updated 2.9 years ago by 3.8k • written 2.9 years ago by ▴ 10
0
votes
1
reply
770
views
Error in ChAMP GUI
ChAMP shiny ChAMPdata
updated 2.1 years ago by • 0 • written 2.1 years ago by • 0
0
votes
3
replies
1.0k
views
Wrong terminology used on champ.load() output of ChAMP package?
ChAMPdata ChAMP
updated 2.3 years ago by ▴ 760 • written 2.3 years ago by • 0
8 results • Page 1 of 1
Recent ...
Replies
Comment: FilterByExpr low counts with small sample size by Gordon Smyth 50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures by Gordon Smyth 50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma by Gordon Smyth 50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with doctor know about Alzheimer and they don't expect significan…
Comment: Single-Cell Data Simulation from Bulk RNA-seq by wichaidi • 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
Awards • All
Popular Question to paria.alipour • 0
Popular Question to Eman • 0
Popular Question to James W. MacDonald 65k
Scholar to nhaus ▴ 30
Popular Question to shepherl 3.8k
Locations • All
France, just now
WEHI, Melbourne, Australia, 2 minutes ago
United States, 16 minutes ago
United States, 25 minutes ago
United States, 1 hour ago
Traffic: 493 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6