Showing : cheminformatics • reset
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cellHTS2 importa and analysing data from chemical compound screening
cellhts2 cheminformatics
updated 7.4 years ago by ▴ 160 • written 7.4 years ago by ▴ 810
3
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1
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681
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Can limma/other DE algorithms be used for differential analysis of chemical descriptors?
limma edger deseq2 cheminformatics
updated 5.7 years ago by ★ 28k • written 5.7 years ago by • 0
1
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890
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Where can I locate the bioassayR database?
bioassayr chemmineR cheminformatics
5.1 years ago Anthony Nash ▴ 20
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1.9k
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Bioc 3.3 Windows 10 eiR package fails to install
software error R cheminformatics package installation eiR
updated 7.9 years ago by • 0 • written 7.9 years ago by • 0
0
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1
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806
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ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf ChemmineOB Cheminformatics ChemmineR
2.7 years ago adelenelai • 0
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BioC 2013, July 17 (Developer Day) 18-19: 'Early' registration deadline July 1
Cheminformatics Visualization Cancer Ovarian DEXSeq minfi DESeq2 BaseSpaceR epivizr minfi
10.8 years ago Martin Morgan 25k
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0
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Comparing compounds in CheminneR
Cheminformatics ChemmineR ChemmineDrugs
8 months ago Sean • 0
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0
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R/BioC workshops in Southern California
Cheminformatics Clustering Cheminformatics Clustering
16.6 years ago Thomas Girke ★ 1.7k
0
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872
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R/BioC workshops in Southern California
Cheminformatics Clustering Cheminformatics Clustering
15.8 years ago Thomas Girke ★ 1.7k
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'Cheminformatics in R' workshop at the EBI: 17-18 May 2010
Metabolomics Cheminformatics Visualization xcms Metabolomics Cheminformatics Visualization
14.2 years ago Gabriella Rustici ▴ 60
10 results • Page 1 of 1
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Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Robert Castelo ★ 3.2k
Hi, your `c2` object storing all the gene sets is probably a `list` object, where element names are the names of the pathways given by MSig…
Comment: Differential peaks that were not identified in diffbind were identified in diseq by lonn • 0
I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
Answer: Cannabis and KEGGgraph by deeenes ▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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Scholar to Robert Castelo ★ 3.2k
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Popular Question to Gordon Smyth 50k
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