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chemminer
•
reset
0
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274
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Comparing compounds in CheminneR
Cheminformatics
ChemmineR
ChemmineDrugs
8 months ago
Sean
• 0
0
votes
1
reply
806
views
ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf
ChemmineOB
Cheminformatics
ChemmineR
2.7 years ago
adelenelai
• 0
0
votes
0
replies
1.3k
views
How to combined multiple *.mol files into a single *.sdf file using ChemmineR?
ChemmineR
Chemmin
ChemmineOB
2.9 years ago
sukissqz
• 0
3
votes
4
replies
1.3k
views
Error in ChemmineR function propOB() and ChemmineOB prop_OB()
ChemmineR
ChemmineOB
updated 3.2 years ago by
Thomas Girke
★ 1.7k • written 3.4 years ago by
teresadijor
• 0
2
votes
6
replies
1.1k
views
How to remove HCL mols in Chemminer
ChemmineR
Chemistry
updated 5.0 years ago by
khoran
• 0 • written 5.1 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
900
views
Bioactivity assay DBs for cheminfo packages
bioassayR
ChemmineR
PubChem
updated 5.1 years ago by
Thomas Girke
★ 1.7k • written 5.1 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
890
views
Where can I locate the bioassayR database?
bioassayr
chemmineR
cheminformatics
5.1 years ago
Anthony Nash
▴ 20
1
vote
4
replies
2.1k
views
How do I convert kegg info on drug to a format allowing me to calculate similarities?
keggrest
chemminer
fmcsr
graph
written 6.1 years ago by
Joris.Meys
• 0
0
votes
0
replies
824
views
Downloading 3D compounds from Pubchem in ChemmineR
chemminer
6.5 years ago
jubilantsundar
• 0
1
vote
2
replies
1.4k
views
drawing chemical from smile 2D/3D
chemminer
updated 6.8 years ago by
Thomas Girke
★ 1.7k • written 6.8 years ago by
Stane
▴ 40
0
votes
0
replies
951
views
Tversky' alpha and beta should not be int, should they?
ChemmineR
7.1 years ago
stephan.struckmann
• 0
0
votes
2
replies
1.4k
views
output of propOB function ChemmineR
ChemmineR
ChemmineOB
ChemmineTools
Drug
7.2 years ago
elisa.micarelli
▴ 10
0
votes
1
reply
2.0k
views
ChemmineR package - fpSim and cmp.similarity - Tanimoto kernels
ChemmineR
updated 8.0 years ago by
Thomas Girke
★ 1.7k • written 8.0 years ago by
ረ
• 0
0
votes
0
replies
1.1k
views
MCS & ChemineR
Network
Clustering
PROcess
ChemmineR
Network
Clustering
PROcess
ChemmineR
11.1 years ago
Thomas Girke
★ 1.7k
0
votes
0
replies
1.1k
views
ChemmineR Help
Clustering
ChemmineR
Clustering
ChemmineR
11.4 years ago
Thomas Girke
★ 1.7k
15 results • Page
1 of 1
Recent ...
Replies
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Robert Castelo
★ 3.2k
Hi, your `c2` object storing all the gene sets is probably a `list` object, where element names are the names of the pathways given by MSig…
Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
lonn
• 0
I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
Answer: Cannabis and KEGGgraph
by
deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
by
russ.bainer
▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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★ 3.2k
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James W. MacDonald
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shepherl
3.8k
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Gordon Smyth
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