Showing : chipqcreport • reset
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Error computing metrics with ChIPQC (Bioconductor v3.5, ChIPQC v2.1.12)
chipqc chipqcreport
updated 4.9 years ago by ▴ 400 • written 4.9 years ago by • 0
2
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ChIPQC - can't read in bam files
chipqc chipqcreport
3.7 years ago molly_the_minotaur ▴ 20
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Unhelpful Errors Running ChIPQC on Computing Cluster
chipqc chipqcreport
4.8 years ago • updated 4.7 years ago jared.andrews07 ▴ 30
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ChIPQCreport Total number of duplicates differs from multiqc/fastqc & RelCC is Inf
ChIPQC ChIPQCreport
updated 5.0 years ago by ▴ 400 • written 5.0 years ago by ▴ 30
4
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2
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846
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ChIPQC : ChIPQCreport(experiment) swap memory overload
ChIPQC ChIPQCreport
updated 5.0 years ago by ▴ 400 • written 5.0 years ago by ▴ 30
1
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3
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650
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ChIPQC installation does not force latest DiffBind version
chipqc diffbind chipqcreport
updated 5.0 years ago by ▴ 400 • written 5.0 years ago by ▴ 50
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ChipQCreport coverage plot failure?
ChipQC chipqcreport
3.8 years ago tapio.envall • 0
7 results • Page 1 of 1
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Comment: broken chain import in liftOver by Marcel Ramos 570
You could also try using one of the chain files in `AnnotationHub`, which gets auto-cached: ```r library(AnnotationHub) query(ah <- Annot…
Answer: paired analysis : return data matrix with indvidual/subject effects eliminated. by James W. MacDonald 59k
See `removeBatchEffect` in the `limma` package.
Comment: GDCdownload Directory Problem :( by Marcel Ramos 570
FWIW, `TCGAutils` is not a related package.
Comment: help please！ by 1051444231 • 0
I have updated Rtools
Comment: help please！ by 1051444231 • 0
> BiocManager::install("AnnotationDbi",force = TRUE) 'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' …
Votes
Answer: broken chain import in liftOver
Answer: toGRanges help!
Answer: toGRanges help!
Comment: CPM after RUVseq
A: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
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