Bioconductor Chipseq

Showing : chipseq • reset

votes

replies

2.9k

views

DiffBind chipseq

updated 9 months ago by Rory Stark ★ 5.2k • written 9 months ago by ANAMIKA • 0

votes

1.1k

views

diffbind chipseq

updated 11 months ago by lin.pei26 • 0 • written 4.7 years ago by danielaperry2015 • 0

vote

433

views

DiffBind chipseq

updated 6 months ago by James W. MacDonald 65k • written 6 months ago by lin.pei26 • 0

vote

replies

1.8k

views

DiffBind R chipseq

updated 4 months ago by Rory Stark ★ 5.2k • written 6.6 years ago by kyliecode • 0

votes

replies

1.1k

views

ChIPpeakAnno ChIPSeq

updated 8 months ago by James W. MacDonald 65k • written 8 months ago by Jerina ▴ 10

votes

replies

592

views

ChIPSeq annotate ChIPpeakAnno

updated 12 months ago by Kai Hu ▴ 70 • written 12 months ago by C T ▴ 140

vote

replies

372

views

chipseq DifferentialMethylation DESeq2

updated 11 weeks ago by Michael Love 41k • written 3 months ago by rebw25 • 0

vote

replies

996

views

ChIPSeq DiffBind

updated 10 months ago by Rory Stark ★ 5.2k • written 11 months ago by lin.pei26 • 0

votes

replies

149

views

ChIPSeq annotation ChIPpeakAnno

10 weeks ago nilanjanamani88 • 0

votes

replies

164

views

bSubControl ChIPSeq DiffBind

3 months ago frueher • 0

votes

replies

274

views

ChIPpeakAnno ChIPSeq MotifDiscovery

7 months ago franciscrick41 • 0

votes

replies

319

views

csaw ChIPseq DiffBind

5 months ago jared.andrews07 ▴ 30

votes

views

chipseq

updated 8 days ago by James W. MacDonald 65k • written 8 days ago by zhulin • 0

13 results • Page 1 of 1

Recent ...

Replies

Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k

This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…

Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0

I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…

Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by shuwangxinze1996 • 0

Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough? Thank …

Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k

This comment helps.

Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k

I am not sure how your comment helps here?

Votes

A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?

A: How to explain how DESeq2 works to someone with zero bioinformatics background?

Answer: Interpret plot from DiffBind

Answer: How to retrieve gene ontology GO class from gene list?

Awards • All

Supporter to JKim • 0