Bioconductor Chromosome

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2.5k

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Gviz chromosome ideogram

updated 7.1 years ago by bernatgel ▴ 150 • written 7.2 years ago by dulunar ▴ 10

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9.6k

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SNP rs id Biomart Chromosome coordinates

updated 9 months ago by James W. MacDonald 65k • written 3.7 years ago by Mahan • 0

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782

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homo sapiens chromosome

updated 5.9 years ago by James W. MacDonald 65k • written 5.9 years ago by xchen8 • 0

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485

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edgeR chromosome RNAseq

updated 4.0 years ago by swbarnes2 ★ 1.3k • written 4.0 years ago by missmoparker • 0

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766

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tximport GCF feature table parsing error chromosome

updated 4.0 years ago by Michael Love 41k • written 4.0 years ago by knholm • 0

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768

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Chromosome Annotation

updated 3.7 years ago by James W. MacDonald 65k • written 3.7 years ago by Bine ▴ 40

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1.8k

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GenomicRanges split chromosome TxDb

updated 2.3 years ago by Hervé Pagès 16k • written 2.3 years ago by jon.klonowski ▴ 40

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535

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gene chromosome proteincodinggene

12 months ago Liliian • 0

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1.8k

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bsgenome chromosome reference genome

updated 6.1 years ago by Hervé Pagès 16k • written 6.1 years ago by Nathan Sheffield ▴ 10

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501

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RefSeq Chromosome Mutalyzer

4.0 years ago heiko_kin ▴ 60

10 results • Page 1 of 1

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Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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