Bioconductor Chromosome

Showing : chromosome • reset

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2.5k

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Gviz chromosome ideogram

updated 7.1 years ago by bernatgel ▴ 150 • written 7.2 years ago by dulunar ▴ 10

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1.8k

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GenomicRanges split chromosome TxDb

updated 2.4 years ago by Hervé Pagès 16k • written 2.4 years ago by jon.klonowski ▴ 40

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772

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Chromosome Annotation

updated 3.7 years ago by James W. MacDonald 65k • written 3.7 years ago by Bine ▴ 40

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9.7k

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SNP rs id Biomart Chromosome coordinates

updated 9 months ago by James W. MacDonald 65k • written 3.7 years ago by Mahan • 0

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1.9k

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bsgenome chromosome reference genome

updated 6.1 years ago by Hervé Pagès 16k • written 6.1 years ago by Nathan Sheffield ▴ 10

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542

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gene chromosome proteincodinggene

12 months ago Liliian • 0

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772

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tximport GCF feature table parsing error chromosome

updated 4.0 years ago by Michael Love 41k • written 4.0 years ago by knholm • 0

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487

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edgeR chromosome RNAseq

updated 4.1 years ago by swbarnes2 ★ 1.3k • written 4.1 years ago by missmoparker • 0

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785

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homo sapiens chromosome

updated 5.9 years ago by James W. MacDonald 65k • written 5.9 years ago by xchen8 • 0

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503

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RefSeq Chromosome Mutalyzer

4.0 years ago heiko_kin ▴ 60

10 results • Page 1 of 1

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Answer: Cannabis OrgDb by Guido Hooiveld ★ 3.9k

> library(AnnotationHub) > hub <- AnnotationHub() snapshotDate(): 2023-10-23 > query(hub, c("cannabis","orgdb") ) …

Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k

To increase readability: could you please reformat your post? Select the R--code, and click the `CODE` button... the 5th button.

Comment: Trying to use enrichGO by fernanda.backsouza • 0

Thank you for yout time guido, 1) When the pvalueCutoff = 1 nothing change. 2) output from str(ortologos_filtrados) data.frame': 14 obs. …

Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k

Please provide more information! In your first post you seem to report another error than in your 2nd post: `No gene can be mapped...` vers…

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Michael Love 41k

I don't really have any additional suggestion here.

Votes

DESeq2: How to find out how well the model fits the data?

Comment: DESeq2 - dispersion estimation when there is none

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa

Answer: OrgDb for maize

Answer: DESeq2 - dispersion estimation when there is none

Awards • All

Scholar to Michael Love 41k