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cibersort deconvR immune

updated 14 days ago by ivorychan7777 • 0 • written 14 months ago by 609b0d25 • 0

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normalization r vst cibersort

updated 3.7 years ago by Kevin Blighe ★ 3.9k • written 3.7 years ago by Matan G. ▴ 60

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Comment: Methylation Analysis experiment design using Limma by hortense96 • 0

Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…

Comment: Limma design with continuous and categorical covariates by hortense96 • 0

Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …

Answer: minfi::read.metharray.exp by Basti ▴ 770

Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…

Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0

Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

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Answer: OrgDb for maize

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

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